RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 GOLGA8JA6NMD2 632 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 HMGA1P17096 107 aaKnown RBP24.59■■□□□ 1.53
PKP3-210ENST00000533249 AVPR1AP37288 418 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 CASP5P51878 434 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 NLRP12P59046 1061 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 BFSP1Q12934 665 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 RESTQ13127 1097 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 CCINQ13939 588 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 SDHAF4Q5VUM1 108 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 TMEM150AQ86TG1 271 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 LONP2Q86WA8 852 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 PDCL2Q8N4E4 241 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 C1orf127Q8N9H9 656 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 PANK2Q9BZ23 570 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 RBAKQ9NYW8 714 aaPredicted RBP24.59■■□□□ 1.53
PKP3-210ENST00000533249 L1RE1Q9UN81 338 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 CCL26Q9Y258 94 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 DENND4CQ5VZ89 1909 aa24.59■■□□□ 1.53
PKP3-210ENST00000533249 ZNF638Q14966 1978 aaKnown RBP24.58■■□□□ 1.53
PKP3-210ENST00000533249 HUS1O60921 280 aa24.58■■□□□ 1.53
PKP3-210ENST00000533249 PAPSS2O95340 614 aaPredicted RBP24.58■■□□□ 1.53
PKP3-210ENST00000533249 F11P03951 625 aa24.58■■□□□ 1.53
PKP3-210ENST00000533249 RETP07949 1114 aa24.58■■□□□ 1.53
PKP3-210ENST00000533249 ACAT1P24752 427 aaKnown RBP24.58■■□□□ 1.53
PKP3-210ENST00000533249 HOXC13P31276 330 aa24.58■■□□□ 1.53
PKP3-210ENST00000533249 NFE2Q16621 373 aaPredicted RBP24.58■■□□□ 1.53
PKP3-210ENST00000533249 SCARA3Q6AZY7 606 aa24.58■■□□□ 1.53
PKP3-210ENST00000533249 CACTINQ8WUQ7 758 aaKnown RBP24.58■■□□□ 1.53
PKP3-210ENST00000533249 FGFBP2Q9BYJ0 223 aa24.58■■□□□ 1.53
PKP3-210ENST00000533249 DDX43Q9NXZ2 648 aaKnown RBP24.58■■□□□ 1.53
PKP3-210ENST00000533249 ZMYM5Q9UJ78 669 aa24.58■■□□□ 1.53
PKP3-210ENST00000533249 PCDHB13Q9Y5F0 798 aa24.58■■□□□ 1.53
PKP3-210ENST00000533249 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.58■■□□□ 1.53
PKP3-210ENST00000533249 LDHAP00338 332 aaKnown RBP24.57■■□□□ 1.52
PKP3-210ENST00000533249 KRT19P08727 400 aa24.57■■□□□ 1.52
PKP3-210ENST00000533249 STAT6P42226 847 aa24.57■■□□□ 1.52
PKP3-210ENST00000533249 TXNDC8Q6A555 127 aa24.57■■□□□ 1.52
PKP3-210ENST00000533249 TRIM68Q6AZZ1 485 aa24.57■■□□□ 1.52
PKP3-210ENST00000533249 CCDC73Q6ZRK6 1079 aa24.57■■□□□ 1.52
PKP3-210ENST00000533249 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.57■■□□□ 1.52
PKP3-210ENST00000533249 HSCBQ8IWL3 235 aa24.57■■□□□ 1.52
PKP3-210ENST00000533249 CSGALNACT2Q8N6G5 542 aa24.57■■□□□ 1.52
PKP3-210ENST00000533249 MRPS31Q92665 395 aaKnown RBP24.57■■□□□ 1.52
PKP3-210ENST00000533249 USP13Q92995 863 aaPredicted RBP24.57■■□□□ 1.52
PKP3-210ENST00000533249 CBWD1Q9BRT8 395 aa24.57■■□□□ 1.52
PKP3-210ENST00000533249 PCIF1Q9H4Z3 704 aa24.57■■□□□ 1.52
PKP3-210ENST00000533249 OLFML3Q9NRN5 406 aa24.57■■□□□ 1.52
PKP3-210ENST00000533249 OBSL1O75147 1896 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 SPTBN2O15020 2390 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 DCDC2BA2VCK2 349 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 CSH1P0DML2 217 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 CSH2P0DML3 217 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 SYT1P21579 422 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 GARTP22102 1010 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 CNR2P34972 360 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 RUNX3Q13761 415 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 DDR2Q16832 855 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 SYNPOQ8N3V7 929 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 FAM83CQ9BQN1 747 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 EBF3Q9H4W6 596 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 PDE11AQ9HCR9 933 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 HPS4Q9NQG7 708 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 TDP1Q9NUW8 608 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 PANK4Q9NVE7 773 aa24.56■■□□□ 1.52
PKP3-210ENST00000533249 PRPF6O94906 941 aaKnown RBP24.55■■□□□ 1.52
PKP3-210ENST00000533249 CYP2F1P24903 491 aa24.55■■□□□ 1.52
PKP3-210ENST00000533249 DDX6P26196 483 aaKnown RBP eCLIP24.55■■□□□ 1.52
PKP3-210ENST00000533249 MYL7Q01449 175 aa24.55■■□□□ 1.52
PKP3-210ENST00000533249 ALCAMQ13740 583 aa24.55■■□□□ 1.52
PKP3-210ENST00000533249 BECN1Q14457 450 aa24.55■■□□□ 1.52
PKP3-210ENST00000533249 CCDC142Q17RM4 750 aa24.55■■□□□ 1.52
PKP3-210ENST00000533249 INTS6LQ5JSJ4 861 aaKnown RBP24.55■■□□□ 1.52
PKP3-210ENST00000533249 CEP68Q76N32 757 aa24.55■■□□□ 1.52
PKP3-210ENST00000533249 LRRC52Q8N7C0 313 aa24.55■■□□□ 1.52
PKP3-210ENST00000533249 LEO1Q8WVC0 666 aaPredicted RBP24.55■■□□□ 1.52
PKP3-210ENST00000533249 ACBD6Q9BR61 282 aa24.55■■□□□ 1.52
PKP3-210ENST00000533249 RTKNQ9BST9 563 aa24.55■■□□□ 1.52
PKP3-210ENST00000533249 GTF3C4Q9UKN8 822 aa24.55■■□□□ 1.52
PKP3-210ENST00000533249 ITGA11Q9UKX5 1188 aa24.55■■□□□ 1.52
PKP3-210ENST00000533249 SNX9Q9Y5X1 595 aa24.55■■□□□ 1.52
PKP3-210ENST00000533249 A0A087X0B3 334 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 OTOL1A6NHN0 477 aaPredicted RBP24.54■■□□□ 1.52
PKP3-210ENST00000533249 EXTL3O43909 919 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 TMEM191BP0C7N4 346 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 RPL10AP62906 217 aaKnown RBP24.54■■□□□ 1.52
PKP3-210ENST00000533249 CC2D1AQ6P1N0 951 aaPredicted RBP24.54■■□□□ 1.52
PKP3-210ENST00000533249 PKN3Q6P5Z2 889 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 MON1AQ86VX9 555 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 OSTM1Q86WC4 334 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 TMEM86AQ8N2M4 240 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 TTC16Q8NEE8 873 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 CXorf38Q8TB03 319 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 RIN3Q8TB24 985 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 USP28Q96RU2 1077 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 MTMR12Q9C0I1 747 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 KIF9Q9HAQ2 790 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 SEMA4GQ9NTN9 838 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 RALGAPA1Q6GYQ0 2036 aa24.54■■□□□ 1.52
PKP3-210ENST00000533249 FRMD3A2A2Y4 597 aa24.53■■□□□ 1.52
PKP3-210ENST00000533249 HCRTO43612 131 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 229.7 ms