RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 SDCBP2Q9H190 292 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 CRTAC1Q9NQ79 661 aa21.87■■□□□ 1.09
CCS-208ENST00000533244 ARMCX3Q9UH62 379 aaPredicted RBP21.87■■□□□ 1.09
CCS-208ENST00000533244 ATP2C2O75185 946 aa21.86■■□□□ 1.09
CCS-208ENST00000533244 GNL1P36915 607 aaPredicted RBP21.86■■□□□ 1.09
CCS-208ENST00000533244 CCR2P41597 374 aa21.86■■□□□ 1.09
CCS-208ENST00000533244 MXI1P50539 228 aa21.86■■□□□ 1.09
CCS-208ENST00000533244 MGAT5BQ3V5L5 792 aa21.86■■□□□ 1.09
CCS-208ENST00000533244 FRMD5Q7Z6J6 570 aa21.86■■□□□ 1.09
CCS-208ENST00000533244 NPAS3Q8IXF0 933 aa21.86■■□□□ 1.09
CCS-208ENST00000533244 HS6ST3Q8IZP7 471 aa21.86■■□□□ 1.09
CCS-208ENST00000533244 SNX25Q9H3E2 840 aa21.86■■□□□ 1.09
CCS-208ENST00000533244 METTL14Q9HCE5 456 aaKnown RBP21.86■■□□□ 1.09
CCS-208ENST00000533244 SORCS3Q9UPU3 1222 aa21.86■■□□□ 1.09
CCS-208ENST00000533244 MRPS23Q9Y3D9 190 aaKnown RBP21.86■■□□□ 1.09
CCS-208ENST00000533244 PTPRDP23468 1912 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 ANHXE9PGG2 379 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 GOLGA6L22H0YM25 854 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 NRG2O14511 850 aaPredicted RBP21.85■■□□□ 1.09
CCS-208ENST00000533244 MOSPD3O75425 235 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 ASGR2P07307 311 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 P4HA1P13674 534 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 ASPAP45381 313 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 CDR1P51861 262 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 STX17P56962 302 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 PSMC1P62191 440 aaKnown RBP21.85■■□□□ 1.09
CCS-208ENST00000533244 MAPRE1Q15691 268 aaKnown RBP21.85■■□□□ 1.09
CCS-208ENST00000533244 SPOPLQ6IQ16 392 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 POTEHQ6S545 545 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 PDZD4Q76G19 769 aaPredicted RBP21.85■■□□□ 1.09
CCS-208ENST00000533244 OR6B3Q8NGW1 331 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 EDAQ92838 391 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 TCEAL4Q96EI5 215 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 MED15Q96RN5 788 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 PI4K2AQ9BTU6 479 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 BCO2Q9BYV7 579 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 MMRN2Q9H8L6 949 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 KCNK12Q9HB15 430 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 APOBEC3GQ9HC16 384 aaKnown RBP21.85■■□□□ 1.09
CCS-208ENST00000533244 C11orf16Q9NQ32 467 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 ASAH2Q9NR71 780 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 IGSF9Q9P2J2 1179 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 COQ4Q9Y3A0 265 aa21.85■■□□□ 1.09
CCS-208ENST00000533244 ZNF197O14709 1029 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 LRRN2O75325 713 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 PDGFRBP09619 1106 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 CEBPBP17676 345 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 RAP1GAPP47736 663 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 CDH8P55286 799 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 MARSP56192 900 aaKnown RBP21.84■■□□□ 1.09
CCS-208ENST00000533244 NOP14P78316 857 aaKnown RBP21.84■■□□□ 1.09
CCS-208ENST00000533244 ZXDAP98168 799 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 CBWD6Q4V339 395 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 DCAF17Q5H9S7 520 aaPredicted RBP21.84■■□□□ 1.09
CCS-208ENST00000533244 CBWD3Q5JTY5 395 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 CBWD5Q5RIA9 395 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 CYP4A22Q5TCH4 519 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 SCARA5Q6ZMJ2 495 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 DNAJB7Q7Z6W7 309 aaPredicted RBP21.84■■□□□ 1.09
CCS-208ENST00000533244 MLKLQ8NB16 471 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 MYCBPAPQ8TBZ2 947 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 SEMA4DQ92854 862 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 NXPE3Q969Y0 559 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 MYLPFQ96A32 169 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 IMPG2Q9BZV3 1241 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 RWDD2AQ9UIY3 292 aa21.84■■□□□ 1.09
CCS-208ENST00000533244 A8MXQ7 604 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 CYP2F1P24903 491 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 MAGEA11P43364 429 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 HTR4Q13639 388 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 TCERG1LQ5VWI1 586 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 C4orf50Q6ZRC1 276 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 ITIH5Q86UX2 942 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 SPATA2LQ8IUW3 424 aaPredicted RBP21.83■■□□□ 1.09
CCS-208ENST00000533244 FBXL13Q8NEE6 735 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 ING5Q8WYH8 240 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 FAXDC2Q96IV6 333 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 LPIN3Q9BQK8 851 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 C1QTNF1Q9BXJ1 281 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 DPEP3Q9H4B8 488 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 GDE1Q9NZC3 331 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 TECTAO75443 2155 aa21.83■■□□□ 1.09
CCS-208ENST00000533244 PTPN1P18031 435 aaKnown RBP21.82■■□□□ 1.08
CCS-208ENST00000533244 MTMR3Q13615 1198 aa21.82■■□□□ 1.08
CCS-208ENST00000533244 VEPH1Q14D04 833 aa21.82■■□□□ 1.08
CCS-208ENST00000533244 RBM43Q6ZSC3 357 aaKnown RBP21.82■■□□□ 1.08
CCS-208ENST00000533244 B3GALNT2Q8NCR0 500 aa21.82■■□□□ 1.08
CCS-208ENST00000533244 PCED1BQ96HM7 432 aa21.82■■□□□ 1.08
CCS-208ENST00000533244 NIF3L1Q9GZT8 377 aa21.82■■□□□ 1.08
CCS-208ENST00000533244 ZNF334Q9HCZ1 680 aaPredicted RBP21.82■■□□□ 1.08
CCS-208ENST00000533244 RAB20Q9NX57 234 aa21.82■■□□□ 1.08
CCS-208ENST00000533244 PMM2O15305 246 aa21.81■■□□□ 1.08
CCS-208ENST00000533244 GPR37L1O60883 481 aa21.81■■□□□ 1.08
CCS-208ENST00000533244 GNA14O95837 355 aa21.81■■□□□ 1.08
CCS-208ENST00000533244 MYL4P12829 197 aa21.81■■□□□ 1.08
CCS-208ENST00000533244 GPR15P49685 360 aa21.81■■□□□ 1.08
CCS-208ENST00000533244 RPL10AP62906 217 aaKnown RBP21.81■■□□□ 1.08
CCS-208ENST00000533244 INCA1Q0VD86 236 aa21.81■■□□□ 1.08
CCS-208ENST00000533244 CCDC40Q4G0X9 1142 aa21.81■■□□□ 1.08
CCS-208ENST00000533244 MDH1BQ5I0G3 518 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms