RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 GIMAP8Q8ND71 665 aaPredicted RBP5.87□□□□□ -1.47
CD44-236ENST00000533222 ANGPTL6Q8NI99 470 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 SEC14L1Q92503 715 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 CASP10Q92851 521 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 TSPAN17Q96FV3 270 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 PEX11GQ96HA9 241 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 ANKRD36BP1Q96IX9 119 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 CLMNQ96JQ2 1002 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 SH3GL2Q99962 352 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 SLF1Q9BQI6 1058 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 HAUS8Q9BT25 410 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 ISCA1Q9BUE6 129 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 CELF4Q9BZC1 486 aaKnown RBP5.87□□□□□ -1.47
CD44-236ENST00000533222 NUF2Q9BZD4 464 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 UNKQ9C0B0 810 aaKnown RBP5.87□□□□□ -1.47
CD44-236ENST00000533222 DNAI2Q9GZS0 605 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 AP5M1Q9H0R1 490 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 TRPV6Q9H1D0 765 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 NCOR1P1Q9H4R4 102 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 GCM1Q9NP62 436 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 ZCCHC17Q9NP64 241 aaKnown RBP5.87□□□□□ -1.47
CD44-236ENST00000533222 SLC6A20Q9NP91 592 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 ARMC1Q9NVT9 282 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 SLC39A1Q9NY26 324 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 SAMD15Q9P1V8 674 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 MYOTQ9UBF9 498 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 RASAL2Q9UJF2 1139 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 LIMCH1Q9UPQ0 1083 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 PLAAQ9Y263 795 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 CFL2Q9Y281 166 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 C2CD2Q9Y426 696 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 LRRC42Q9Y546 428 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 PDS5AQ29RF7 1337 aaKnown RBP5.87□□□□□ -1.47
CD44-236ENST00000533222 PLEKHG1Q9ULL1 1385 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 FHOD3Q2V2M9 1422 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 FMN1Q68DA7 1419 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 TOP2AP11388 1531 aaKnown RBP5.87□□□□□ -1.47
CD44-236ENST00000533222 E9PCH4 1651 aa5.87□□□□□ -1.47
CD44-236ENST00000533222 CDC42BPAQ5VT25 1732 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 NSD2O96028 1365 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 A0A088AWK7 358 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 TCRBV5S2A0A599 114 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 GSG1L2A8MUP6 293 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 CENPBD1B2RD01 187 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 GCOM1H8Y6P7 765 aaPredicted RBP5.86□□□□□ -1.47
CD44-236ENST00000533222 PSMD14O00487 310 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 MAN2B1O00754 1011 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 HGSO14964 777 aaPredicted RBP5.86□□□□□ -1.47
CD44-236ENST00000533222 GUCY1B2O75343 617 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 FKBP9O95302 570 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 S100BP04271 92 aaPredicted RBP5.86□□□□□ -1.47
CD44-236ENST00000533222 MYZAPP0CAP1 466 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 UBTFL6P0CB48 400 aaPredicted RBP5.86□□□□□ -1.47
CD44-236ENST00000533222 PPP2R1AP30153 589 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 RPL9P32969 192 aaKnown RBP5.86□□□□□ -1.47
CD44-236ENST00000533222 SERPINB6P35237 376 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 TRIM23P36406 574 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 ASMTP46597 345 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 COPAP53621 1224 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 BPIFB4P59827 614 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 KRT83P78385 493 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 CAP1Q01518 475 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 KLC1Q07866 573 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 SIM2Q14190 667 aaPredicted RBP5.86□□□□□ -1.47
CD44-236ENST00000533222 SEMA3AQ14563 771 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 ZNF268Q14587 947 aaPredicted RBP5.86□□□□□ -1.47
CD44-236ENST00000533222 MYLK3Q32MK0 819 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 TMEM177Q53S58 311 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 CAVIN4Q5BKX8 364 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 WDR45BQ5MNZ6 344 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 SLC10A5Q5PT55 438 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 SNX30Q5VWJ9 437 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 KIAA1614Q5VZ46 1190 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 SIGIRRQ6IA17 410 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 OGFOD2Q6N063 350 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 SLC2A7Q6PXP3 512 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 C6orf89Q6UWU4 347 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 RANBP10Q6VN20 620 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 ARHGAP36Q6ZRI8 547 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 C16orf59Q7L2K0 433 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 HDGFL2Q7Z4V5 671 aaPredicted RBP5.86□□□□□ -1.47
CD44-236ENST00000533222 VPS36Q86VN1 386 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 FAM228AQ86W67 206 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 THNSL2Q86YJ6 484 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 TMEM151BQ8IW70 566 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 ANKRD44Q8N8A2 993 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 BBOF1Q8ND07 529 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 ALG3Q92685 438 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 KIFAP3Q92845 792 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 PEX13Q92968 403 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 IQCDQ96DY2 449 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 VPS50Q96JG6 964 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 RPRD1AQ96P16 312 aaPredicted RBP5.86□□□□□ -1.47
CD44-236ENST00000533222 RBM14Q96PK6 669 aaKnown RBP5.86□□□□□ -1.47
CD44-236ENST00000533222 CDRT15Q96T59 188 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 TIPINQ9BVW5 301 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 FAM129AQ9BZQ8 928 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 GBA3Q9H227 469 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 PLEKHA5Q9HAU0 1116 aa5.86□□□□□ -1.47
CD44-236ENST00000533222 SAMSN1Q9NSI8 373 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms