RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 ASB7Q9H672 318 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 IL21Q9HBE4 155 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 HPS4Q9NQG7 708 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 C2CD2Q9Y426 696 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 ATG2BQ96BY7 2078 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 TCHHQ07283 1943 aa12.47□□□□□ -0.41
CMTM1-216ENST00000533078 WDFY3Q8IZQ1 3526 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 A0A0B4J269 797 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 VWA3AA6NCI4 1184 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 PIRO00625 290 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 SLC26A4O43511 780 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.41
CMTM1-216ENST00000533078 PIGRP01833 764 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 ADRB2P07550 413 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 NFICP08651 508 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 HAPLN1P10915 354 aaPredicted RBP12.46□□□□□ -0.41
CMTM1-216ENST00000533078 UBA7P41226 1012 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 PNPLA4P41247 253 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 TOB1P50616 345 aaPredicted RBP12.46□□□□□ -0.41
CMTM1-216ENST00000533078 DGKEP52429 567 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 NLRP12P59046 1061 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 RPL10AP62906 217 aaKnown RBP12.46□□□□□ -0.41
CMTM1-216ENST00000533078 ZNF268Q14587 947 aaPredicted RBP12.46□□□□□ -0.41
CMTM1-216ENST00000533078 USP39Q53GS9 565 aaKnown RBP12.46□□□□□ -0.41
CMTM1-216ENST00000533078 PKN3Q6P5Z2 889 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 SYT13Q7L8C5 426 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 GPBP1Q86WP2 473 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 TMEM130Q8N3G9 435 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 FSIP1Q8NA03 581 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 TSTD1Q8NFU3 115 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 KCNN1Q92952 543 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 USP13Q92995 863 aaPredicted RBP12.46□□□□□ -0.41
CMTM1-216ENST00000533078 CD101Q93033 1021 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 AK8Q96MA6 479 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 SMOC1Q9H4F8 434 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.46□□□□□ -0.41
CMTM1-216ENST00000533078 RXFP3Q9NSD7 469 aa12.46□□□□□ -0.41
CMTM1-216ENST00000533078 DUS2Q9NX74 493 aaKnown RBP12.46□□□□□ -0.41
CMTM1-216ENST00000533078 CPSF3Q9UKF6 684 aaKnown RBP12.46□□□□□ -0.41
CMTM1-216ENST00000533078 R3HCC1Q9Y3T6 440 aaKnown RBP12.46□□□□□ -0.41
CMTM1-216ENST00000533078 TRAV19A0A0A6YYK7 116 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 NPHP3-ACAD11A0A0J9YXS1 232 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 ANO9A1A5B4 782 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 KHNYNO15037 678 aaKnown RBP12.45□□□□□ -0.42
CMTM1-216ENST00000533078 TRAK2O60296 914 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 CKMP06732 381 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 USP17L7P0C7H9 530 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 ARSAP15289 507 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 NMT1P30419 496 aaKnown RBP12.45□□□□□ -0.42
CMTM1-216ENST00000533078 GJA4P35212 333 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 PDE6CP51160 858 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 GALK1P51570 392 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 ATP2C1P98194 919 aaPredicted RBP12.45□□□□□ -0.42
CMTM1-216ENST00000533078 FAM160A1Q05DH4 1040 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 ZNF252P-AS1Q0IIN9 211 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 DHX8Q14562 1220 aaKnown RBP12.45□□□□□ -0.42
CMTM1-216ENST00000533078 DMC1Q14565 340 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 MTF1Q14872 753 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 IL17AQ16552 155 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 WSCD1Q658N2 575 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 ARL6IP4Q66PJ3 421 aaKnown RBP12.45□□□□□ -0.42
CMTM1-216ENST00000533078 TXNDC8Q6A555 127 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 UNQ6494/PRO21346Q6UXR6 183 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 MON1AQ86VX9 555 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 NT5DC4Q86YG4 428 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 REEP2Q9BRK0 252 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 DUSP15Q9H1R2 295 aaPredicted RBP12.45□□□□□ -0.42
CMTM1-216ENST00000533078 TMEM206Q9H813 350 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 ECT2Q9H8V3 914 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 TRPC7Q9HCX4 862 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 TMEM9BQ9NQ34 198 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 DPP3Q9NY33 737 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 EBF1Q9UH73 591 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 AGO2Q9UKV8 859 aaKnown RBP12.45□□□□□ -0.42
CMTM1-216ENST00000533078 CCL26Q9Y258 94 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 TSC2P49815 1807 aa12.45□□□□□ -0.42
CMTM1-216ENST00000533078 BCLAF3A2AJT9 711 aaKnown RBP12.44□□□□□ -0.42
CMTM1-216ENST00000533078 TMEM8BA6NDV4 472 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 C4orf47A7E2U8 309 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 KPNA7A9QM74 516 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 H3BQV1 296 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 FAM189A1O60320 539 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 HUS1O60921 280 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 ALDH1A2O94788 518 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 IL18RAPO95256 599 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 NFATC1O95644 943 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 F11P03951 625 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 ACOT2P49753 483 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 CDR1P51861 262 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 MYL7Q01449 175 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 POU5F1Q01860 360 aaKnown RBP12.44□□□□□ -0.42
CMTM1-216ENST00000533078 FOXC1Q12948 553 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 KCNB1Q14721 858 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 TMEM119Q4V9L6 283 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 LMBRD2Q68DH5 695 aaPredicted RBP12.44□□□□□ -0.42
CMTM1-216ENST00000533078 TCEAL6Q6IPX3 200 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 CYP2U1Q7Z449 544 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 OSCP1Q8WVF1 389 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 TCEAL3Q969E4 200 aa12.44□□□□□ -0.42
CMTM1-216ENST00000533078 PNMA5Q96PV4 448 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms