RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 SUGP1Q8IWZ8 645 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 DCP1BQ8IZD4 617 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 PDCL2Q8N4E4 241 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 AOPEPQ8N6M6 819 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 ATAD1Q8NBU5 361 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 SPPL2BQ8TCT7 592 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 RSAD2Q8WXG1 361 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 CNOT6LQ96LI5 555 aaKnown RBP13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 TMEM209Q96SK2 561 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 CORO1BQ9BR76 489 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 CRISPLD1Q9H336 500 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 THAP9Q9H5L6 903 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 SLC2A4RGQ9NR83 387 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 NFE2L3Q9Y4A8 694 aa13.87□□□□□ -0.19
TRAPPC4-212ENST00000533058 STAU1O95793 577 aaKnown RBP13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 GCLMP48507 274 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 LHX1P48742 406 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 EPHB3P54753 998 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 MYL5Q02045 173 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 NFE2Q16621 373 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 SLC39A12Q504Y0 691 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 SCARA3Q6AZY7 606 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 LRRTM3Q86VH5 581 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 ENOX1Q8TC92 643 aaKnown RBP13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 FGF14Q92915 247 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 HPDLQ96IR7 371 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 PGLYRP2Q96PD5 576 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 MED15Q96RN5 788 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 PRRX2Q99811 253 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 LRRC3Q9BY71 257 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 GPR88Q9GZN0 384 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 SMOC2Q9H3U7 446 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 ASAH2Q9NR71 780 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 L1RE1Q9UN81 338 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 SNX9Q9Y5X1 595 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 NUMBLQ9Y6R0 609 aa13.86□□□□□ -0.19
TRAPPC4-212ENST00000533058 DOCK6Q96HP0 2047 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 NOTCH4Q99466 2003 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 ZDBF2Q9HCK1 2354 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 SMTNL1A8MU46 457 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 BECN2A8MW95 431 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 PES1O00541 588 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 IKBKBO14920 756 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 ECI2O75521 394 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 FGF19O95750 216 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 CCR2P41597 374 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 PIK3CAP42336 1068 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 ZNF165P49910 485 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 MCCD1P59942 119 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 MYL7Q01449 175 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 TSPY1Q01534 308 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 ENPEPQ07075 957 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 SOWAHAQ2M3V2 549 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 PARM1Q6UWI2 310 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 ITIH5Q86UX2 942 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 ZNF516Q92618 1163 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 PSMG2Q969U7 264 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 ABCB6Q9NP58 842 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 RAPGEFL1Q9UHV5 662 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 SLC27A5Q9Y2P5 690 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 ZNF318Q5VUA4 2279 aa13.85□□□□□ -0.19
TRAPPC4-212ENST00000533058 MOSPD3O75425 235 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 CST3P01034 146 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 TPM2P07951 284 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 CEBPBP17676 345 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 CDK11BP21127 795 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 PCSK1P29120 753 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 AVPR2P30518 371 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 ATICP31939 592 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 GTF2H1P32780 548 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 MXI1P50539 228 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 CLCN5P51795 746 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 PPP3CAQ08209 521 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 INTS6LQ5JSJ4 861 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 TDRD10Q5VZ19 366 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 POTEHQ6S545 545 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 SV2AQ7L0J3 742 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 DNAJB7Q7Z6W7 309 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 TMC8Q8IU68 726 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 ADGRF2Q8IZF7 708 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 CCDC150Q8NCX0 1101 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 ANKRD20A12PQ8NF67 263 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 TCEAL4Q96EI5 215 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 PKMYT1Q99640 499 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 FUCA2Q9BTY2 467 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 TSPY26PQ9H489 355 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 VRTNQ9H8Y1 702 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 TRPV4Q9HBA0 871 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 TMEM8AQ9HCN3 771 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 SAMSN1Q9NSI8 373 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 DDX43Q9NXZ2 648 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 PCDHB5Q9Y5E4 795 aa13.84□□□□□ -0.19
TRAPPC4-212ENST00000533058 KCNJ18B7U540 433 aa13.83□□□□□ -0.2
TRAPPC4-212ENST00000533058 NARSO43776 548 aaKnown RBP13.83□□□□□ -0.2
TRAPPC4-212ENST00000533058 TACC1O75410 805 aa13.83□□□□□ -0.2
TRAPPC4-212ENST00000533058 PDGFBP01127 241 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC4-212ENST00000533058 C4BPAP04003 597 aaKnown RBP13.83□□□□□ -0.2
TRAPPC4-212ENST00000533058 HAPLN1P10915 354 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC4-212ENST00000533058 PRKCSHP14314 528 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms