RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 LRRC52Q8N7C0 313 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 ZBTB44Q8NCP5 570 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 STKLD1Q8NE28 680 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 SECISBP2LQ93073 1101 aaKnown RBP19.15■□□□□ 0.66
PCF11-206ENST00000533018 ANKRD36BP1Q96IX9 119 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 ACBD6Q9BR61 282 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 IER2Q9BTL4 223 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 SLC46A2Q9BY10 475 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 FAM126AQ9BYI3 521 aaPredicted RBP19.15■□□□□ 0.66
PCF11-206ENST00000533018 IL21Q9HBE4 155 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 OBP2AQ9NY56 170 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 DENND4CQ5VZ89 1909 aa19.15■□□□□ 0.66
PCF11-206ENST00000533018 ZNF233A6NK53 670 aa19.14■□□□□ 0.65
PCF11-206ENST00000533018 TNNC2P02585 160 aa19.14■□□□□ 0.65
PCF11-206ENST00000533018 CXCL12P48061 93 aa19.14■□□□□ 0.65
PCF11-206ENST00000533018 GPR15P49685 360 aa19.14■□□□□ 0.65
PCF11-206ENST00000533018 ASIC1P78348 528 aa19.14■□□□□ 0.65
PCF11-206ENST00000533018 DDR2Q16832 855 aa19.14■□□□□ 0.65
PCF11-206ENST00000533018 SDHAF4Q5VUM1 108 aa19.14■□□□□ 0.65
PCF11-206ENST00000533018 SCARA3Q6AZY7 606 aa19.14■□□□□ 0.65
PCF11-206ENST00000533018 CELF5Q8N6W0 485 aaKnown RBP19.14■□□□□ 0.65
PCF11-206ENST00000533018 MAB21L3Q8N8X9 362 aa19.14■□□□□ 0.65
PCF11-206ENST00000533018 GLIS3Q8NEA6 775 aa19.14■□□□□ 0.65
PCF11-206ENST00000533018 RBM12Q9NTZ6 932 aaKnown RBP19.14■□□□□ 0.65
PCF11-206ENST00000533018 GTF3C4Q9UKN8 822 aa19.14■□□□□ 0.65
PCF11-206ENST00000533018 KIAA0391O15091 583 aaKnown RBP19.13■□□□□ 0.65
PCF11-206ENST00000533018 PPP6R2O75170 966 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 HSP90AA1P07900 732 aaKnown RBP19.13■□□□□ 0.65
PCF11-206ENST00000533018 CSH1P0DML2 217 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 CSH2P0DML3 217 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 CYP2F1P24903 491 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 PLCB2Q00722 1185 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 TNK2Q07912 1038 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 MYO1EQ12965 1108 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 PON2Q15165 354 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 RALGPS2Q86X27 583 aaPredicted RBP19.13■□□□□ 0.65
PCF11-206ENST00000533018 ADGRF2Q8IZF7 708 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 CMTM8Q8IZV2 173 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 IQUBQ8NA54 791 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 TTC16Q8NEE8 873 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 TRIM9Q9C026 710 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 CUEDC2Q9H467 287 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 KBTBD4Q9NVX7 518 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 SMG5Q9UPR3 1016 aaKnown RBP19.13■□□□□ 0.65
PCF11-206ENST00000533018 CEP250Q9BV73 2442 aa19.13■□□□□ 0.65
PCF11-206ENST00000533018 MYBPHLA2RUH7 354 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 CUTAO60888 179 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 LILRB5O75023 590 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 WEE1P30291 646 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 CTHP32929 405 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 LHX1P48742 406 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 NLRP12P59046 1061 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 RPL10AP62906 217 aaKnown RBP19.12■□□□□ 0.65
PCF11-206ENST00000533018 DUOXA2Q1HG44 320 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 INTS6LQ5JSJ4 861 aaKnown RBP19.12■□□□□ 0.65
PCF11-206ENST00000533018 TXNDC8Q6A555 127 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 TXNDC11Q6PKC3 985 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 ERMP1Q7Z2K6 904 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 CBWD2Q8IUF1 395 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 SPATA2LQ8IUW3 424 aaPredicted RBP19.12■□□□□ 0.65
PCF11-206ENST00000533018 TOP6BLQ8N6T0 577 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 RDH13Q8NBN7 331 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 MRPS31Q92665 395 aaKnown RBP19.12■□□□□ 0.65
PCF11-206ENST00000533018 NELL1Q92832 810 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 RMDN1Q96DB5 314 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 HPDLQ96IR7 371 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 EPC1Q9H2F5 836 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 GKN1Q9NS71 199 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 INTS13Q9NVM9 706 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 GDAP2Q9NXN4 497 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 HSPBP1Q9NZL4 362 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 SIX4Q9UIU6 781 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 ZMYM5Q9UJ78 669 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 RAB23Q9ULC3 237 aa19.12■□□□□ 0.65
PCF11-206ENST00000533018 OBSL1O75147 1896 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.11■□□□□ 0.65
PCF11-206ENST00000533018 YEATS4O95619 227 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 F11P03951 625 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 HMGA1P17096 107 aaKnown RBP19.11■□□□□ 0.65
PCF11-206ENST00000533018 DDX6P26196 483 aaKnown RBP eCLIP19.11■□□□□ 0.652e-19■□□□□ 10
PCF11-206ENST00000533018 PCSK1P29120 753 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 SATB1Q01826 763 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 SURF1Q15526 300 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 E2F4Q16254 413 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 LPAL2Q16609 132 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 SOWAHAQ2M3V2 549 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 ITPRIPL2Q3MIP1 535 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 DGKKQ5KSL6 1271 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 MAMSTRQ6ZN01 415 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 OSTM1Q86WC4 334 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 SCN4BQ8IWT1 228 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 SPEM1Q8N4L4 309 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 OR5B17Q8NGF7 314 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 CXorf38Q8TB03 319 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 LEO1Q8WVC0 666 aaPredicted RBP19.11■□□□□ 0.65
PCF11-206ENST00000533018 TDP1Q9NUW8 608 aa19.11■□□□□ 0.65
PCF11-206ENST00000533018 ATG2BQ96BY7 2078 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 PTPRJQ12913 1337 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 HCRTO43612 131 aa19.1■□□□□ 0.65
PCF11-206ENST00000533018 GAS6Q14393 721 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms