RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 TPM3P06753 285 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 HOXB8P17481 243 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 TUFMP49411 452 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 RBM10P98175 930 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 CYP27A1Q02318 531 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 DUSP4Q13115 394 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 COL19A1Q14993 1142 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 ARHGAP44Q17R89 818 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 ZNF394Q53GI3 561 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 SMYD5Q6GMV2 418 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 ANKRD54Q6NXT1 300 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 GJB7Q6PEY0 223 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 TMEM270Q6UE05 265 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 ACOT1Q86TX2 421 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 GAS2L3Q86XJ1 694 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 TCEAL8Q8IYN2 117 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 ATAD1Q8NBU5 361 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 B3GALNT2Q8NCR0 500 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 VN1R2Q8NFZ6 395 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 NEK11Q8NG66 645 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 SPPL2BQ8TCT7 592 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 WHAMMQ8TF30 809 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 KAT5Q92993 513 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 HLA-CQ95604 372 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 TMEM176AQ96HP8 235 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 HEXIM2Q96MH2 286 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 KREMEN1Q96MU8 473 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 DPEP3Q9H4B8 488 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 SIX2Q9NPC8 291 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 CRTAC1Q9NQ79 661 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 MAN1C1Q9NR34 630 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 DZANK1Q9NVP4 752 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 IFNKQ9P0W0 207 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 HSFX1Q9UBD0 423 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 FBXW11Q9UKB1 542 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 KIAA1257Q9ULG3 409 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 SLC27A5Q9Y2P5 690 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 DAAM1Q9Y4D1 1078 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 SCN1AP35498 2009 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 A0A1W2PQC6 194 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 MTMR11A4FU01 709 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 CBFA2T2O43439 604 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 SEC24AO95486 1093 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 C8AP07357 584 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 KRT5P13647 590 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 UCHL3P15374 230 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 ACO1P21399 889 aaKnown RBP11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 RFX1P22670 979 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 ALDH1A3P47895 512 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 RAD23BP54727 409 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 PLCB2Q00722 1185 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 APBA1Q02410 837 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 ORC1Q13415 861 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 MDH1BQ5I0G3 518 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 PPM1LQ5SGD2 360 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 IQCEQ6IPM2 695 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 DPY19L2P1Q6NXN4 242 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 UBR7Q8N806 425 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 MYLPFQ96A32 169 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 PCED1BQ96HM7 432 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 FUBP3Q96I24 572 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 TWNKQ96RR1 684 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 PKMYT1Q99640 499 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 ELOVL4Q9GZR5 314 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 ABCB6Q9NP58 842 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 FAM207AQ9NSI2 230 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 TMLHEQ9NVH6 421 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 ABI2Q9NYB9 513 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 HMGXB4Q9UGU5 601 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 COG5Q9UP83 839 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 SIK3Q9Y2K2 1263 aa11.96□□□□□ -0.49
TRAPPC4-211ENST00000533012 COL4A4P53420 1690 aaPredicted RBP11.96□□□□□ -0.5
TRAPPC4-211ENST00000533012 ATP8B3O60423 1300 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 CCDC195A0A1B0GUA6 201 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 ZMYND10O75800 440 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 GLP2RO95838 553 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 LRG1P02750 347 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 HNRNPA1P09651 372 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 LTBRP36941 435 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 USP8P40818 1118 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 KLK7P49862 253 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 CDR1P51861 262 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 POLR2FP61218 127 aaKnown RBP11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 DLX2Q07687 328 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 PLD1Q13393 1074 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 RAPGEF1Q13905 1077 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 DRAP1Q14919 205 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 MGAT5BQ3V5L5 792 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 CFAP221Q4G0U5 840 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 C12orf29Q8N999 325 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 SLC4A11Q8NBS3 891 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 SLC7A14Q8TBB6 771 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 CYFIP2Q96F07 1278 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 SEPT5Q99719 369 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 LPIN3Q9BQK8 851 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 MED10Q9BTT4 135 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 B3GNT5Q9BYG0 378 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 STK33Q9BYT3 514 aa11.95□□□□□ -0.5
TRAPPC4-211ENST00000533012 UBE2ZQ9H832 354 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms