RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 ADSSP30520 456 aa18.48■□□□□ 0.55
CTSB-226ENST00000532656 WNT7BP56706 349 aa18.48■□□□□ 0.55
CTSB-226ENST00000532656 GRSF1Q12849 480 aaKnown RBP eCLIP18.48■□□□□ 0.55
CTSB-226ENST00000532656 TMEM196Q5HYL7 178 aa18.48■□□□□ 0.55
CTSB-226ENST00000532656 LARP1BQ659C4 914 aaKnown RBP18.48■□□□□ 0.55
CTSB-226ENST00000532656 ZNF720Q7Z2F6 126 aa18.48■□□□□ 0.55
CTSB-226ENST00000532656 RIN3Q8TB24 985 aa18.48■□□□□ 0.55
CTSB-226ENST00000532656 CHFRQ96EP1 664 aa18.48■□□□□ 0.55
CTSB-226ENST00000532656 ZNF560Q96MR9 790 aa18.48■□□□□ 0.55
CTSB-226ENST00000532656 ARRDC1-AS1Q9H2J1 176 aa18.48■□□□□ 0.55
CTSB-226ENST00000532656 TDP1Q9NUW8 608 aa18.48■□□□□ 0.55
CTSB-226ENST00000532656 POLR3BQ9NW08 1133 aaPredicted RBP18.48■□□□□ 0.55
CTSB-226ENST00000532656 PRPF40AO75400 957 aaKnown RBP18.47■□□□□ 0.55
CTSB-226ENST00000532656 IL18RAPO95256 599 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 POLR2BP30876 1174 aaKnown RBP18.47■□□□□ 0.55
CTSB-226ENST00000532656 DDIT3P35638 169 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 TFAMQ00059 246 aaKnown RBP18.47■□□□□ 0.55
CTSB-226ENST00000532656 TSPY1Q01534 308 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 KCNA1Q09470 495 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 SF3A2Q15428 464 aaKnown RBP18.47■□□□□ 0.55
CTSB-226ENST00000532656 AASDHQ4L235 1098 aaPredicted RBP18.47■□□□□ 0.55
CTSB-226ENST00000532656 USP49Q70CQ1 688 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 BRAPQ7Z569 592 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 ZSWIM2Q8NEG5 633 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 GAB3Q8WWW8 586 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 SAAL1Q96ER3 474 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 EPSTI1Q96J88 318 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 FAM213AQ9BRX8 229 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 ZMYM5Q9UJ78 669 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 SLC8A2Q9UPR5 921 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 GREB1Q4ZG55 1949 aa18.47■□□□□ 0.55
CTSB-226ENST00000532656 KMT2BQ9UMN6 2715 aaPredicted RBP18.46■□□□□ 0.55
CTSB-226ENST00000532656 RNF40O75150 1001 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 RPP40O75818 363 aaKnown RBP18.46■□□□□ 0.55
CTSB-226ENST00000532656 PPP1R37O75864 691 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 EGFP01133 1207 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 ITGB3P05106 788 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 CSH1P0DML2 217 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 CSH2P0DML3 217 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 CCDC192P0DO97 292 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 ACAT1P24752 427 aaKnown RBP18.46■□□□□ 0.55
CTSB-226ENST00000532656 DDX6P26196 483 aaKnown RBP eCLIP18.46■□□□□ 0.55
CTSB-226ENST00000532656 POU5F1Q01860 360 aaKnown RBP18.46■□□□□ 0.55
CTSB-226ENST00000532656 POSTNQ15063 836 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 DDR2Q16832 855 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 NAIF1Q69YI7 327 aaPredicted RBP18.46■□□□□ 0.55
CTSB-226ENST00000532656 CC2D1AQ6P1N0 951 aaPredicted RBP18.46■□□□□ 0.55
CTSB-226ENST00000532656 KBTBD6Q86V97 674 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 PDCL2Q8N4E4 241 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 TTC16Q8NEE8 873 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 MRPS31Q92665 395 aaKnown RBP18.46■□□□□ 0.55
CTSB-226ENST00000532656 HVCN1Q96D96 273 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 FAM84AQ96KN4 292 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 MRPL44Q9H9J2 332 aaKnown RBP18.46■□□□□ 0.55
CTSB-226ENST00000532656 KIF9Q9HAQ2 790 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 FBRSL1Q9HCM7 1045 aaKnown RBP18.46■□□□□ 0.55
CTSB-226ENST00000532656 TBC1D7Q9P0N9 293 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 L1RE1Q9UN81 338 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 AGAP1Q9UPQ3 857 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 SPAG17Q6Q759 2223 aa18.46■□□□□ 0.55
CTSB-226ENST00000532656 TRDMT1O14717 391 aaKnown RBP18.45■□□□□ 0.54
CTSB-226ENST00000532656 FOXD2O60548 495 aaPredicted RBP18.45■□□□□ 0.54
CTSB-226ENST00000532656 TADA3O75528 432 aa18.45■□□□□ 0.54
CTSB-226ENST00000532656 CYP2F1P24903 491 aa18.45■□□□□ 0.54
CTSB-226ENST00000532656 PNPLA4P41247 253 aa18.45■□□□□ 0.54
CTSB-226ENST00000532656 CCDC142Q17RM4 750 aa18.45■□□□□ 0.54
CTSB-226ENST00000532656 SCARA3Q6AZY7 606 aa18.45■□□□□ 0.54
CTSB-226ENST00000532656 IL31Q6EBC2 164 aa18.45■□□□□ 0.54
CTSB-226ENST00000532656 CACNA2D4Q7Z3S7 1137 aa18.45■□□□□ 0.54
CTSB-226ENST00000532656 NT5DC4Q86YG4 428 aa18.45■□□□□ 0.54
CTSB-226ENST00000532656 C1orf127Q8N9H9 656 aa18.45■□□□□ 0.54
CTSB-226ENST00000532656 C12orf50Q8NA57 414 aaPredicted RBP18.45■□□□□ 0.54
CTSB-226ENST00000532656 RXFP3Q9NSD7 469 aa18.45■□□□□ 0.54
CTSB-226ENST00000532656 DDX43Q9NXZ2 648 aaKnown RBP18.45■□□□□ 0.54
CTSB-226ENST00000532656 EML5Q05BV3 1969 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 MYMKA6NI61 221 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 ATG13O75143 517 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 NFE2Q16621 373 aaPredicted RBP18.44■□□□□ 0.54
CTSB-226ENST00000532656 L1TD1Q5T7N2 865 aaKnown RBP18.44■□□□□ 0.54
CTSB-226ENST00000532656 MON1AQ86VX9 555 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 BRSK2Q8IWQ3 736 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 NOC3LQ8WTT2 800 aaKnown RBP18.44■□□□□ 0.54
CTSB-226ENST00000532656 LEO1Q8WVC0 666 aaPredicted RBP18.44■□□□□ 0.54
CTSB-226ENST00000532656 ACCSQ96QU6 501 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 HHIPQ96QV1 700 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 STRA6Q9BX79 667 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 SMOC1Q9H4F8 434 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 TRPC7Q9HCX4 862 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 SEL1LQ9UBV2 794 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 STK17AQ9UEE5 414 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.44■□□□□ 0.54
CTSB-226ENST00000532656 CLIC4Q9Y696 253 aa18.44■□□□□ 0.54
CTSB-226ENST00000532656 CCDC163A0A0D9SF12 145 aa18.43■□□□□ 0.54
CTSB-226ENST00000532656 VPS37CA5D8V6 355 aaPredicted RBP18.43■□□□□ 0.54
CTSB-226ENST00000532656 GOLGA8IPA6NC78 632 aa18.43■□□□□ 0.54
CTSB-226ENST00000532656 GOLGA8JA6NMD2 632 aa18.43■□□□□ 0.54
CTSB-226ENST00000532656 HCRTO43612 131 aa18.43■□□□□ 0.54
CTSB-226ENST00000532656 HUS1O60921 280 aa18.43■□□□□ 0.54
CTSB-226ENST00000532656 EPN2O95208 641 aa18.43■□□□□ 0.54
CTSB-226ENST00000532656 GCNT3O95395 438 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms