RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 HIST1H2ADP20671 130 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 CCT5P48643 541 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 ATPAF2Q8N5M1 289 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 ARMC2Q8NEN0 867 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 HIST1H2AHQ96KK5 128 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 SLITRK1Q96PX8 696 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 HIST1H2AJQ99878 128 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 H2AFJQ9BTM1 129 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 TRIM8Q9BZR9 551 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 MUC3BQ9H195 1237 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 RASA4BC9J798 803 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 RASA4O43374 803 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 ZC3H11AO75152 810 aaKnown RBP eCLIP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 DCTN3O75935 186 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 SOX10P56693 466 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 CNTN2Q02246 1040 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 PPIL2Q13356 520 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 WDR75Q8IWA0 830 aaKnown RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 CYP2W1Q8TAV3 490 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 USP33Q8TEY7 942 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 PLEKHA8Q96JA3 519 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 L3MBTL3Q96JM7 780 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 MTG1Q9BT17 334 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-232ENST00000532649 AIPL1Q9NZN9 384 aa9.12□□□□□ -0.95
CTNND1-232ENST00000532649 RASSF10A6NK89 507 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 MAPK13O15264 365 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 ZNF189O75820 626 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 WDR47O94967 919 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 AKR1A1P14550 325 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 INSRRP14616 1297 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 PMS2P54278 862 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 CUL2Q13617 745 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 GRIK4Q16099 956 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 C10orf120Q5SQS8 335 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 CYP4A22Q5TCH4 519 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 IL31Q6EBC2 164 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 DEFB128Q7Z7B8 93 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 TLK2Q86UE8 772 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 CBWD1Q9BRT8 395 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 TSEN34Q9BSV6 310 aaKnown RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 ABHD16BQ9H3Z7 469 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 TRIM17Q9Y577 477 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 FAM187AA6NFU0 413 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 CSDE1O75534 798 aaKnown RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 NCAM1P13591 858 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 CASP4P49662 377 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 TMPRSS15P98073 1019 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 LAMTOR4Q0VGL1 99 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 NT5DC4Q86YG4 428 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 CD302Q8IX05 232 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 ATP8B4Q8TF62 1192 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 DPF3Q92784 378 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 PABPC5Q96DU9 382 aaKnown RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 AGAP3Q96P47 875 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 YME1L1Q96TA2 773 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 VTA1Q9NP79 307 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 METTL5Q9NRN9 209 aaKnown RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 RHBDL3P58872 404 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 ORC1Q13415 861 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 TP53BP2Q13625 1128 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 MAPRE1Q15691 268 aaKnown RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 NAB2Q15742 525 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 SYCP2LQ5T4T6 812 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 DEPDC1Q5TB30 811 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 ELOA2Q8IYF1 753 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 ENGASEQ8NFI3 743 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 FBXL5Q9UKA1 691 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 RIC1Q4ADV7 1423 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 HOXA2O43364 376 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 RPLP2P05387 115 aaKnown RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 AKT1P31749 480 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 EFHC1Q5JVL4 640 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 TRAPPC11Q7Z392 1133 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 ZNF677Q86XU0 584 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 ZFYVE1Q9HBF4 777 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 XPNPEP3Q9NQH7 507 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 A0A087WUV0 522 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 PQBP1O60828 265 aaKnown RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 GPD1P21695 349 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 ARHGEF7Q14155 803 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 GJC2Q5T442 439 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 TDRD10Q5VZ19 366 aaKnown RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 SHCBP1Q8NEM2 672 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 TRPM4Q8TD43 1214 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 ASAP3Q8TDY4 903 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 DNAJB3Q8WWF6 145 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 VMP1Q96GC9 406 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 CYTH2Q99418 400 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 ZNF556Q9HAH1 456 aa9.11□□□□□ -0.95
CTNND1-232ENST00000532649 KRCC1Q9NPI7 259 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.11□□□□□ -0.95
CTNND1-232ENST00000532649 SIGLEC1Q9BZZ2 1709 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 FAM86B1E9PN63 330 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 FAM86B2P0C5J1 330 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 IFT88Q13099 833 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 ARHGAP15Q53QZ3 475 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 KRT78Q8N1N4 520 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 HASPINQ8TF76 798 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 MRIQ9BWK5 157 aa9.1□□□□□ -0.95
CTNND1-232ENST00000532649 AMACRQ9UHK6 382 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms