RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 DCP1BQ8IZD4 617 aaKnown RBP20.35■□□□□ 0.85
SSH3-209ENST00000532600 TOP6BLQ8N6T0 577 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 FSIP1Q8NA03 581 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 RDH13Q8NBN7 331 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 KBTBD7Q8WVZ9 684 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 CLDN23Q96B33 292 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 PAGE5Q96GU1 130 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 ACBD6Q9BR61 282 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 PI4K2AQ9BTU6 479 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 SLITRK6Q9H5Y7 841 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 TRPV5Q9NQA5 729 aa20.35■□□□□ 0.85
SSH3-209ENST00000532600 FANCMQ8IYD8 2048 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 F5P12259 2224 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 WDR87Q6ZQQ6 2873 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 PRAMEF12O95522 483 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 SLFN14P0C7P3 912 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 SP9P0CG40 484 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 CYP2J2P51589 502 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 CYP24A1Q07973 514 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 FCHO2Q0JRZ9 810 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 GPR158Q5T848 1215 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 WDR49Q8IV35 697 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 ADGRF2Q8IZF7 708 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 TMEM86AQ8N2M4 240 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 FAM200AQ8TCP9 573 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 PLEKHO2Q8TD55 490 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 DEPDC1BQ8WUY9 529 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 ANKRD36BP1Q96IX9 119 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 GTF3C4Q9UKN8 822 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 NME7Q9Y5B8 376 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 PCDHB5Q9Y5E4 795 aa20.34■□□□□ 0.85
SSH3-209ENST00000532600 RIF1Q5UIP0 2472 aaKnown RBP20.34■□□□□ 0.85
SSH3-209ENST00000532600 KIF26AQ9ULI4 1882 aaPredicted RBP20.33■□□□□ 0.85
SSH3-209ENST00000532600 MYBPHLA2RUH7 354 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 ATP2C2O75185 946 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 CST3P01034 146 aaPredicted RBP20.33■□□□□ 0.85
SSH3-209ENST00000532600 F11P03951 625 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 CYP2F1P24903 491 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 TSPY1Q01534 308 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 STK4Q13043 487 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 PSMD6Q15008 389 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 DUOXA2Q1HG44 320 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 ZNF852Q6ZMS4 543 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 TRAPPC11Q7Z392 1133 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 KIAA0895Q8NCT3 520 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 ZNF516Q92618 1163 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 IRF7Q92985 503 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 HPDLQ96IR7 371 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 SMG9Q9H0W8 520 aaKnown RBP20.33■□□□□ 0.85
SSH3-209ENST00000532600 KIAA1586Q9HCI6 787 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 R4GN57 208 aa20.33■□□□□ 0.85
SSH3-209ENST00000532600 CFAP54Q96N23 3096 aa20.33■□□□□ 0.84
SSH3-209ENST00000532600 FGF19O95750 216 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 TNNC2P02585 160 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 LMO2P25791 158 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 WEE1P30291 646 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 VEPH1Q14D04 833 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 SURF1Q15526 300 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 C12orf56Q8IXR9 622 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 XXYLT1Q8NBI6 393 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 SPATA18Q8TC71 538 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 NKD2Q969F2 451 aaPredicted RBP20.32■□□□□ 0.84
SSH3-209ENST00000532600 CCDC127Q96BQ5 260 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 CGRRF1Q99675 332 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 SLC46A2Q9BY10 475 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 TASP1Q9H6P5 420 aa20.32■□□□□ 0.84
SSH3-209ENST00000532600 ZNF263O14978 683 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 PRPF40AO75400 957 aaKnown RBP20.31■□□□□ 0.84
SSH3-209ENST00000532600 TADA3O75528 432 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 DLATP10515 647 aaKnown RBP20.31■□□□□ 0.84
SSH3-209ENST00000532600 NLRP12P59046 1061 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 SNRPFP62306 86 aaKnown RBP20.31■□□□□ 0.84
SSH3-209ENST00000532600 MYL7Q01449 175 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 NFE2Q16621 373 aaPredicted RBP20.31■□□□□ 0.84
SSH3-209ENST00000532600 DDR2Q16832 855 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 KNOP1Q1ED39 458 aaKnown RBP20.31■□□□□ 0.84
SSH3-209ENST00000532600 WDR44Q5JSH3 913 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 FAM171BQ6P995 826 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 CEP57L1Q8IYX8 460 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 E2F7Q96AV8 911 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 ZFYVE19Q96K21 471 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 BCO2Q9BYV7 579 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 ABCB6Q9NP58 842 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 CRTAC1Q9NQ79 661 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 PIAS3Q9Y6X2 628 aa20.31■□□□□ 0.84
SSH3-209ENST00000532600 FAM186AA6NE01 2351 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 ZNF292O60281 2723 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 PTPRDP23468 1912 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 GVINP1Q7Z2Y8 2422 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 CHADO15335 359 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 CDC25CP30307 473 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 SYKP43405 635 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 RPS9P46781 194 aaKnown RBP20.3■□□□□ 0.84
SSH3-209ENST00000532600 SOX9P48436 509 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 LHX1P48742 406 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 CASP4P49662 377 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 MYO1EQ12965 1108 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 KMT5BQ4FZB7 885 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 DPH6Q7L8W6 267 aa20.3■□□□□ 0.84
SSH3-209ENST00000532600 FMR1NBQ8N0W7 255 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms