RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 KLK7P49862 253 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 LRMPQ12912 555 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 KIAA0319Q5VV43 1072 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 WSCD1Q658N2 575 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 IQCEQ6IPM2 695 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 THEM5Q8N1Q8 247 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 KBTBD7Q8WVZ9 684 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 SHC3Q92529 594 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 KREMEN1Q96MU8 473 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 ACBD6Q9BR61 282 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 NUCKS1Q9H1E3 243 aaKnown RBP13.35□□□□□ -0.27
COPB1-208ENST00000532088 SMYD3Q9H7B4 428 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 NGRNQ9NPE2 291 aaKnown RBP13.35□□□□□ -0.27
COPB1-208ENST00000532088 CISHQ9NSE2 258 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 FNIP2Q9P278 1114 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 MAP10Q9P2G4 905 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 MTRRQ9UBK8 725 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 STXBP5LQ9Y2K9 1186 aa13.35□□□□□ -0.27
COPB1-208ENST00000532088 FSCN2O14926 492 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 TBC1D4O60343 1298 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 ADCY5O95622 1261 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 URODP06132 367 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 TPM1P09493 284 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 ACO1P21399 889 aaKnown RBP13.34□□□□□ -0.27
COPB1-208ENST00000532088 JAM2P57087 298 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 POLR2FP61218 127 aaKnown RBP13.34□□□□□ -0.27
COPB1-208ENST00000532088 SMARCB1Q12824 385 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 GPM6BQ13491 265 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 ARID5BQ14865 1188 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 PLA2G2CQ5R387 149 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 OVOS1Q6IE37 1185 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 PTCRAQ6ISU1 281 aaPredicted RBP13.34□□□□□ -0.27
COPB1-208ENST00000532088 ZNF280DQ6N043 979 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 RRAGAQ7L523 313 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 CACNA2D4Q7Z3S7 1137 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 VPS52Q8N1B4 723 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 ZNF397Q8NF99 534 aaPredicted RBP13.34□□□□□ -0.27
COPB1-208ENST00000532088 POF1BQ8WVV4 589 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 SDCBP2Q9H190 292 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 SNX25Q9H3E2 840 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 RXFP1Q9HBX9 757 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 TLR9Q9NR96 1032 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 MRPL17Q9NRX2 175 aaKnown RBP13.34□□□□□ -0.27
COPB1-208ENST00000532088 CDH9Q9ULB4 789 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 KIAA1257Q9ULG3 409 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 CAPN11Q9UMQ6 739 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 FHOD1Q9Y613 1164 aa13.34□□□□□ -0.27
COPB1-208ENST00000532088 VWA8A3KMH1 1905 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 F8VZ95 297 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 I3L4J1 428 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 EPHB6O15197 1021 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 PAEPP09466 180 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 WEE2P0C1S8 567 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 CCDC172P0C7W6 258 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 CTHP32929 405 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 GNL1P36915 607 aaPredicted RBP13.33□□□□□ -0.28
COPB1-208ENST00000532088 ZNF132P52740 706 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 ZBED6P86452 979 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 TBX2Q13207 712 aaPredicted RBP13.33□□□□□ -0.28
COPB1-208ENST00000532088 SMC1AQ14683 1233 aaKnown RBP13.33□□□□□ -0.28
COPB1-208ENST00000532088 DRAP1Q14919 205 aaPredicted RBP13.33□□□□□ -0.28
COPB1-208ENST00000532088 MAPRE1Q15691 268 aaKnown RBP13.33□□□□□ -0.28
COPB1-208ENST00000532088 RTP2Q5QGT7 225 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 SLC8B1Q6J4K2 584 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 KIAA1841Q6NSI8 718 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 GJB7Q6PEY0 223 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 SCARA5Q6ZMJ2 495 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 FAM71AQ8IYT1 594 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 CRYBG2Q8N1P7 616 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 OR6B3Q8NGW1 331 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 LNX1Q8TBB1 728 aaPredicted RBP13.33□□□□□ -0.28
COPB1-208ENST00000532088 BAP1Q92560 729 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 SYN2Q92777 582 aaPredicted RBP13.33□□□□□ -0.28
COPB1-208ENST00000532088 TNIP3Q96KP6 325 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 SPAG5Q96R06 1193 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 ARID3AQ99856 593 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 MRPL45Q9BRJ2 306 aaKnown RBP13.33□□□□□ -0.28
COPB1-208ENST00000532088 NT5C1AQ9BXI3 368 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 GPR88Q9GZN0 384 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 ZNF576Q9H609 170 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 DDX43Q9NXZ2 648 aaKnown RBP13.33□□□□□ -0.28
COPB1-208ENST00000532088 LMCD1Q9NZU5 365 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 IMPACTQ9P2X3 320 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 MAFFQ9ULX9 164 aa13.33□□□□□ -0.28
COPB1-208ENST00000532088 PLXNA4Q9HCM2 1894 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 A8MXQ7 604 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 GRM6O15303 877 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 GYPCP04921 128 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 SOX5P35711 763 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 STAT1P42224 750 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 RAP1GAPP47736 663 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 NDST1P52848 882 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 CDH8P55286 799 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 BPIFB4P59827 614 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 APBA1Q02410 837 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 RAPGEF1Q13905 1077 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 NR6A1Q15406 480 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 PTPN14Q15678 1187 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 PSMD5Q16401 504 aa13.32□□□□□ -0.28
COPB1-208ENST00000532088 MEA1Q16626 185 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms