RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 ZNF268Q14587 947 aaPredicted RBP11.9□□□□□ -0.5
NXF1-211ENST00000531709 ZNF568Q3ZCX4 644 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 WLSQ5T9L3 541 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 CCDC60Q8IWA6 550 aaPredicted RBP11.9□□□□□ -0.5
NXF1-211ENST00000531709 PPIL6Q8IXY8 311 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 DLGAP2Q9P1A6 1054 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 NENFQ9UMX5 172 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 NUB1Q9Y5A7 615 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 UBIAD1Q9Y5Z9 338 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 NAV1Q8NEY1 1877 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 UMODL1Q5DID0 1318 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 M0QYV0 167 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 ALDH18A1P54886 795 aaKnown RBP11.9□□□□□ -0.5
NXF1-211ENST00000531709 VCPP55072 806 aaKnown RBP11.9□□□□□ -0.5
NXF1-211ENST00000531709 MORF4L2Q15014 288 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 STXBP2Q15833 593 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 ZBTB41Q5SVQ8 909 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 TMEM154Q6P9G4 183 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 BZW1Q7L1Q6 419 aaKnown RBP11.9□□□□□ -0.5
NXF1-211ENST00000531709 MAP7D3Q8IWC1 876 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 KATNAL2Q8IYT4 538 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 TTC8Q8TAM2 541 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 LPAR1Q92633 364 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 CD101Q93033 1021 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 SYT11Q9BT88 431 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 FOXP3Q9BZS1 431 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 CISHQ9NSE2 258 aa11.9□□□□□ -0.5
NXF1-211ENST00000531709 G3BP2Q9UN86 482 aaKnown RBP11.9□□□□□ -0.5
NXF1-211ENST00000531709 H3BRJ5 948 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 MAP3K7O43318 606 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 ZC3H11AO75152 810 aaKnown RBP eCLIP11.89□□□□□ -0.51
NXF1-211ENST00000531709 BGNP21810 368 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 YY1P25490 414 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 PPP1R2P3Q6NXS1 205 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 NUDCD3Q8IVD9 361 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 ACAP3Q96P50 834 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 B2RBV5 119 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 KCNN4O15554 427 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 ZWINTO95229 277 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 SAT1P21673 171 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 SERPINB3P29508 390 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 RAP1GAPP47736 663 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 EPHB1P54762 984 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 NOMO3P69849 1222 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 ZNF200P98182 395 aaPredicted RBP11.89□□□□□ -0.51
NXF1-211ENST00000531709 ROR1Q01973 937 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 ARID3BQ8IVW6 561 aaPredicted RBP11.89□□□□□ -0.51
NXF1-211ENST00000531709 C12orf56Q8IXR9 622 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 UBA3Q8TBC4 463 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 LRRN4Q8WUT4 740 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 C17orf75Q9HAS0 396 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 CAPN9O14815 690 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 NVLO15381 856 aaKnown RBP11.89□□□□□ -0.51
NXF1-211ENST00000531709 MED7O43513 233 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 OPHN1O60890 802 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 PYGBP11216 843 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 SERPINB6P35237 376 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 RNF43Q68DV7 783 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 C12orf50Q8NA57 414 aaPredicted RBP11.89□□□□□ -0.51
NXF1-211ENST00000531709 CCDC124Q96CT7 223 aaKnown RBP11.89□□□□□ -0.51
NXF1-211ENST00000531709 SLITRK1Q96PX8 696 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 MRIQ9BWK5 157 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 AS3MTQ9HBK9 375 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 CPSF2Q9P2I0 782 aaKnown RBP11.89□□□□□ -0.51
NXF1-211ENST00000531709 STRIP2Q9ULQ0 834 aa11.89□□□□□ -0.51
NXF1-211ENST00000531709 E2F8A0AVK6 867 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 CSDE1O75534 798 aaKnown RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 MTA2O94776 668 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 RGS7P49802 495 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 KLC1Q07866 573 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 THOC5Q13769 683 aaKnown RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 ZACNQ401N2 412 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 C1orf146Q5VVC0 180 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 OTOAQ7RTW8 1153 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 MFSD14AQ96MC6 490 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 THTPAQ9BU02 230 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 SHCBP1LQ9BZQ2 653 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 CYP4F11Q9HBI6 524 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 TRIM49D1C9J1S8 452 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 DHX15O43143 795 aaKnown RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 FDX1P10109 184 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 MYL2P10916 166 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 CALB2P22676 271 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 CDH8P55286 799 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 SLC8A3P57103 927 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 CIAPIN1Q6FI81 312 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 SDCCAG8Q86SQ7 713 aaPredicted RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 CRLF3Q8IUI8 442 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 RPF1Q9H9Y2 349 aaKnown RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 SHANK3Q9BYB0 1731 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 ATP8B3O60423 1300 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 C2orf71A6NGG8 1288 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 ZNF862O60290 1169 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 UNGP13051 313 aaPredicted RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 NCF2P19878 526 aaPredicted RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 RFC1P35251 1148 aaPredicted RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 ELK3P41970 407 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 BCAR1P56945 870 aa11.88□□□□□ -0.51
NXF1-211ENST00000531709 C1QBPQ07021 282 aaKnown RBP11.88□□□□□ -0.51
NXF1-211ENST00000531709 RIPK1Q13546 671 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms