RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PDGFRLQ15198 375 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 KYAT1Q16773 422 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 DDR2Q16832 855 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 C2orf27AQ580R0 203 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 WSCD1Q658N2 575 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 ANO7Q6IWH7 933 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 DCP1BQ8IZD4 617 aaKnown RBP9.98□□□□□ -0.81
NEDD8-206ENST00000531430 CPA6Q8N4T0 437 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 CCDC33Q8N5R6 958 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 IGSF22Q8N9C0 903 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 SYT2Q8N9I0 419 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-206ENST00000531430 TSTD1Q8NFU3 115 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 FBXO18Q8NFZ0 1043 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 SPPL2BQ8TCT7 592 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 CD101Q93033 1021 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 TMEM9BQ9NQ34 198 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 DPP3Q9NY33 737 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 DSEQ9UL01 958 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 TBX20Q9UMR3 447 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 LIMCH1Q9UPQ0 1083 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 PCDHB5Q9Y5E4 795 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-206ENST00000531430 WNT6Q9Y6F9 365 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 ABCA7Q8IZY2 2146 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 FRYQ5TBA9 3013 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 BAHCC1Q9P281 2608 aa9.98□□□□□ -0.81
NEDD8-206ENST00000531430 VWA3AA6NCI4 1184 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 PATE3B3GLJ2 98 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 K7ENM7 598 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 PIRO00625 290 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 F11P03951 625 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 CKMP06732 381 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 WEE1P30291 646 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 TAF6P49848 677 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 IRX4P78413 519 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 TSPY1Q01534 308 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 ST3GAL1Q11201 340 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 NR1H3Q13133 447 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 MTF1Q14872 753 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 KARSQ15046 597 aaKnown RBP9.97□□□□□ -0.81
NEDD8-206ENST00000531430 FBXO43Q4G163 708 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 ADALQ6DHV7 355 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 ARMCX6Q7L4S7 300 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 SYT13Q7L8C5 426 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 CYP2U1Q7Z449 544 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 MON1AQ86VX9 555 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 SCN4BQ8IWT1 228 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 CD302Q8IX05 232 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 PGBD3Q8N328 593 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 DEFB124Q8NES8 71 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 NOC3LQ8WTT2 800 aaKnown RBP9.97□□□□□ -0.81
NEDD8-206ENST00000531430 PNMA5Q96PV4 448 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 MMTAG2Q9BU76 263 aaKnown RBP9.97□□□□□ -0.81
NEDD8-206ENST00000531430 SCNM1Q9BWG6 230 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 LINC00597Q9H2U6 94 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 ECT2Q9H8V3 914 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 HSFX1Q9UBD0 423 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 FAM208BQ5VWN6 2430 aa9.97□□□□□ -0.81
NEDD8-206ENST00000531430 LNP1A1A4G5 178 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 CSH1P0DML2 217 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 CSH2P0DML3 217 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 HMGA1P17096 107 aaKnown RBP9.96□□□□□ -0.82
NEDD8-206ENST00000531430 ACAT1P24752 427 aaKnown RBP9.96□□□□□ -0.82
NEDD8-206ENST00000531430 DDX6P26196 483 aaKnown RBP eCLIP9.96□□□□□ -0.821e-6■■■□□ 15.5
NEDD8-206ENST00000531430 SLC12A3P55017 1021 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 NCKAP1LP55160 1127 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 TMEM150AQ86TG1 271 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 GPBP1Q86WP2 473 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 ARL14EPQ8N8R7 260 aaPredicted RBP9.96□□□□□ -0.82
NEDD8-206ENST00000531430 RASSF8Q8NHQ8 419 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 C2orf15Q8WU43 125 aaKnown RBP9.96□□□□□ -0.82
NEDD8-206ENST00000531430 ACDQ96AP0 544 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 ADAM33Q9BZ11 813 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 KIF9Q9HAQ2 790 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 TMLHEQ9NVH6 421 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 ZMYM5Q9UJ78 669 aa9.96□□□□□ -0.82
NEDD8-206ENST00000531430 MYH11P35749 1972 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 GON4LQ3T8J9 2241 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 LAMA1P25391 3075 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 TRAV19A0A0A6YYK7 116 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 A0A0B4J269 797 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 KPNA7A9QM74 516 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 ANKRD63C9JTQ0 380 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 LAD1O00515 517 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 TRAK2O60296 914 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 SEC24BO95487 1268 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 ABL1P00519 1130 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 CYP11A1P05108 521 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 USP17L7P0C7H9 530 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 CEACAM1P13688 526 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 HDCP19113 662 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 BCKDHBP21953 392 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 PAX3P23760 479 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 CYP2F1P24903 491 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 ATXN3P54252 364 aaPredicted RBP9.95□□□□□ -0.82
NEDD8-206ENST00000531430 RPL10AP62906 217 aaKnown RBP9.95□□□□□ -0.82
NEDD8-206ENST00000531430 HMGN5P82970 282 aaKnown RBP9.95□□□□□ -0.82
NEDD8-206ENST00000531430 SMARCB1Q12824 385 aa9.95□□□□□ -0.82
NEDD8-206ENST00000531430 SV2CQ496J9 727 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms