RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 DPP6P42658 865 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 PTGER3P43115 390 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 RARRES1P49788 294 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 ATXN3P54252 364 aaPredicted RBP8.99□□□□□ -0.97
CD44-232ENST00000531118 NPY5RQ15761 445 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 MAPK6Q16659 721 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 LYSMD4Q5XG99 296 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 LIAT1Q6ZQX7 453 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 LPCAT2Q7L5N7 544 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 DHX32Q7L7V1 743 aaKnown RBP8.99□□□□□ -0.97
CD44-232ENST00000531118 MINDY1Q8N5J2 469 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 TTC9BQ8N6N2 239 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 CEP120Q8N960 986 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 OLIG1Q8TAK6 271 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 RIN3Q8TB24 985 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 BSNDQ8WZ55 320 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 HAS1Q92839 578 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 PSMG2Q969U7 264 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 SPACA7Q96KW9 195 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 GCNAQ96QF7 691 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 C2orf40Q9H1Z8 148 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 TASP1Q9H6P5 420 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 SH3GLB2Q9NR46 395 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 GKN1Q9NS71 199 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 TMEM74BQ9NUR3 256 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 DKK4Q9UBT3 224 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 TBX20Q9UMR3 447 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 RAI2Q9Y5P3 530 aa8.99□□□□□ -0.97
CD44-232ENST00000531118 TCHHQ07283 1943 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 ANAPC1Q9H1A4 1944 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 MTMR11A4FU01 709 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 SOAT2O75908 522 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 CD59P13987 128 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 LIG1P18858 919 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 CDC25CP30307 473 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 GJA4P35212 333 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 HOXD12P35452 270 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 P2RY2P41231 377 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 ABCG1P45844 678 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 GALK1P51570 392 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 AMPD2Q01433 879 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 PSMD2Q13200 908 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 NTRK3Q16288 839 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 ADCK5Q3MIX3 580 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 LURAP1LQ8IV03 231 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 TPH2Q8IWU9 490 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 TMEFF1Q8IYR6 380 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 BLIDQ8IZY5 108 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 APPL2Q8NEU8 664 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 OR2I1PQ8NGU4 316 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 CD101Q93033 1021 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 ZMAT2Q96NC0 199 aaKnown RBP8.98□□□□□ -0.97
CD44-232ENST00000531118 FNBP1Q96RU3 617 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 KIF9Q9HAQ2 790 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 CAPN10Q9HC96 672 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 ANO2Q9NQ90 1003 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 ANKEF1Q9NU02 776 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 SLC38A7Q9NVC3 462 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 CCL26Q9Y258 94 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 ASB3Q9Y575 518 aa8.98□□□□□ -0.97
CD44-232ENST00000531118 A0A087WV48 116 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 ACKR2O00590 384 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 SLITRK3O94933 977 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 GCFC2P16383 781 aaKnown RBP8.97□□□□□ -0.97
CD44-232ENST00000531118 IFNAR1P17181 557 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 GRM5P41594 1212 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 ALDH1A3P47895 512 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 YARSP54577 528 aaKnown RBP8.97□□□□□ -0.97
CD44-232ENST00000531118 WNT7BP56706 349 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 DUSP4Q13115 394 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 AAMPQ13685 434 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 MCM6Q14566 821 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 TRIP6Q15654 476 aaKnown RBP8.97□□□□□ -0.97
CD44-232ENST00000531118 XKR4Q5GH76 650 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 ATF7IP2Q5U623 682 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 RNF20Q5VTR2 975 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 LMBRD2Q68DH5 695 aaPredicted RBP8.97□□□□□ -0.97
CD44-232ENST00000531118 MAEAQ7L5Y9 396 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 KRT25Q7Z3Z0 450 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 ZNF605Q86T29 641 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 ITIH5Q86UX2 942 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 CPA6Q8N4T0 437 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 PNPLA1Q8N8W4 532 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 MCPH1Q8NEM0 835 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 USP33Q8TEY7 942 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 RLN3Q8WXF3 142 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 EXOC4Q96A65 974 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 TBC1D32Q96NH3 1257 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 CAMK1GQ96NX5 476 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 EIF2AK1Q9BQI3 630 aaKnown RBP8.97□□□□□ -0.97
CD44-232ENST00000531118 LPIN3Q9BQK8 851 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 ESYT1Q9BSJ8 1104 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 TOPORSQ9NS56 1045 aaPredicted RBP8.97□□□□□ -0.97
CD44-232ENST00000531118 PILRBQ9UKJ0 227 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 MMP17Q9ULZ9 603 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 SLC6A14Q9UN76 642 aa8.97□□□□□ -0.97
CD44-232ENST00000531118 COL5A1P20908 1838 aaPredicted RBP8.96□□□□□ -0.97
CD44-232ENST00000531118 SH3BP5O60239 455 aa8.96□□□□□ -0.98
CD44-232ENST00000531118 HNRNPLP14866 589 aaKnown RBP eCLIP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms