RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 CSH2P0DML3 217 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 PDCP20941 246 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 ACAT1P24752 427 aaKnown RBP17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 DDX6P26196 483 aaKnown RBP eCLIP17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 ADSSP30520 456 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 STAT6P42226 847 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 NLRP12P59046 1061 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 MYL7Q01449 175 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 CCINQ13939 588 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 NFE2Q16621 373 aaPredicted RBP17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 TXNDC8Q6A555 127 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 CRELD2Q6UXH1 353 aaPredicted RBP17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 PRR23CQ6ZRP0 262 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 NT5DC4Q86YG4 428 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 BRSK2Q8IWQ3 736 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 SYNPOQ8N3V7 929 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 PDCL2Q8N4E4 241 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 CACTINQ8WUQ7 758 aaKnown RBP17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 EBF3Q9H4W6 596 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 DDX43Q9NXZ2 648 aaKnown RBP17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 L1RE1Q9UN81 338 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 SLC8A2Q9UPR5 921 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 CCL26Q9Y258 94 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 GOLGA8IPA6NC78 632 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 GOLGA8JA6NMD2 632 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 EXTL3O43909 919 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 CCDC192P0DO97 292 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 TGM1P22735 817 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 WEE1P30291 646 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 PXNP49023 591 aaPredicted RBP17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 RPL10AP62906 217 aaKnown RBP17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 POU5F1Q01860 360 aaKnown RBP17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 KCNA1Q09470 495 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 RUNX3Q13761 415 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 AASDHQ4L235 1098 aaPredicted RBP17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 WDR5BQ86VZ2 330 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 ADGRF2Q8IZF7 708 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 FAM160A2Q8N612 972 aaPredicted RBP17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 C1orf127Q8N9H9 656 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 USP13Q92995 863 aaPredicted RBP17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 FAM84AQ96KN4 292 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 TDP1Q9NUW8 608 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 TMLHEQ9NVH6 421 aa17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 UXTQ9UBK9 157 aaPredicted RBP17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 FBXO2Q9UK22 296 aaPredicted RBP17.01■□□□□ 0.31
CHMP4A-204ENST00000530996 MYMKA6NI61 221 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 PPP1R37O75864 691 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 CKMP06732 381 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 ARSAP15289 507 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 WNT7BP56706 349 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 AMPD2Q01433 879 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 CSRP2Q16527 193 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 DDR2Q16832 855 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 INTS6LQ5JSJ4 861 aaKnown RBP17■□□□□ 0.31
CHMP4A-204ENST00000530996 SPATA2LQ8IUW3 424 aaPredicted RBP17■□□□□ 0.31
CHMP4A-204ENST00000530996 SCN4BQ8IWT1 228 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 CSGALNACT2Q8N6G5 542 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 ZSWIM2Q8NEG5 633 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 NUP210Q8TEM1 1887 aaPredicted RBP17■□□□□ 0.31
CHMP4A-204ENST00000530996 CNTNAP3BQ96NU0 1288 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 CLIC6Q96NY7 704 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 CNTNAP3Q9BZ76 1288 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 MTMR12Q9C0I1 747 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 HPS4Q9NQG7 708 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 ITGA11Q9UKX5 1188 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 PCDHB13Q9Y5F0 798 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 SNX9Q9Y5X1 595 aa17■□□□□ 0.31
CHMP4A-204ENST00000530996 RPP40O75818 363 aaKnown RBP16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 LDHAP00338 332 aaKnown RBP16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 F11P03951 625 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 HMGA1P17096 107 aaKnown RBP16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 CYP2F1P24903 491 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 PCSK1P29120 753 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 HOXC13P31276 330 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 CASP5P51878 434 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 ALCAMQ13740 583 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 PPM1JQ5JR12 505 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 LMBRD2Q68DH5 695 aaPredicted RBP16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 PKN3Q6P5Z2 889 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 CCDC73Q6ZRK6 1079 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 TMEM150AQ86TG1 271 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 TMEM86AQ8N2M4 240 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 CPA6Q8N4T0 437 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 LRRC52Q8N7C0 313 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 C12orf50Q8NA57 414 aaPredicted RBP16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 LEO1Q8WVC0 666 aaPredicted RBP16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 EXOC4Q96A65 974 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 CBWD1Q9BRT8 395 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 PCIF1Q9H4Z3 704 aa16.99■□□□□ 0.31
CHMP4A-204ENST00000530996 TRAV19A0A0A6YYK7 116 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 SLC30A4O14863 429 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 ATG13O75143 517 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 RNF40O75150 1001 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 GARTP22102 1010 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 IFNAR2P48551 515 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 KCNB1Q14721 858 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 MTF1Q14872 753 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 PDGFRLQ15198 375 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 CCDC6Q16204 474 aa16.98■□□□□ 0.31
CHMP4A-204ENST00000530996 CCDC142Q17RM4 750 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms