RNA–Protein interactions for RNA: ENST00000530656.5

PRDM11-204, Transcript of PR/SET domain 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRDM11, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-204ENST00000530656 HESX1Q9UBX0 185 aa13.9□□□□□ -0.18
PRDM11-204ENST00000530656 HMGXB4Q9UGU5 601 aa13.9□□□□□ -0.18
PRDM11-204ENST00000530656 GIT1Q9Y2X7 761 aa13.9□□□□□ -0.18
PRDM11-204ENST00000530656 UTP11Q9Y3A2 253 aaKnown RBP13.9□□□□□ -0.18
PRDM11-204ENST00000530656 SIGLEC16A6NMB1 481 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 KPNA7A9QM74 516 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 HUS1O60921 280 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 CHRNA1P02708 482 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 CTSHP09668 335 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 PYGMP11217 842 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 DESP17661 470 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 GBP1P32455 592 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 GABRB2P47870 512 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 FNTAP49354 379 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 ACLYP53396 1101 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 PSMC1P62191 440 aaKnown RBP13.9□□□□□ -0.19
PRDM11-204ENST00000530656 PDCLQ13371 301 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 ACAP1Q15027 740 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 PTPN20Q4JDL3 420 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 C2CD6Q53TS8 623 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 FAM26DQ5JW98 314 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 PHLDB2Q86SQ0 1253 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 TOP6BLQ8N6T0 577 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 APPL2Q8NEU8 664 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 CAVIN3Q969G5 261 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 RBM41Q96IZ5 413 aaKnown RBP13.9□□□□□ -0.19
PRDM11-204ENST00000530656 MCEEQ96PE7 176 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 SNX25Q9H3E2 840 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 ERVK-5Q9HDB9 667 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 FAM114A2Q9NRY5 505 aa13.9□□□□□ -0.19
PRDM11-204ENST00000530656 DDX56Q9NY93 547 aaKnown RBP13.9□□□□□ -0.19
PRDM11-204ENST00000530656 TRIP11Q15643 1979 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 ZMYND10O75800 440 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 GLI1P08151 1106 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 KRT3P12035 628 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 PAX3P23760 479 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 GPD2P43304 727 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 SSR1P43307 286 aaKnown RBP13.89□□□□□ -0.19
PRDM11-204ENST00000530656 DR1Q01658 176 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 CYP1B1Q16678 543 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 ODF2Q5BJF6 829 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 ARHGAP17Q68EM7 881 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 C12orf50Q8NA57 414 aaPredicted RBP13.89□□□□□ -0.19
PRDM11-204ENST00000530656 OR6B3Q8NGW1 331 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 EXD1Q8NHP7 514 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 STK32AQ8WU08 396 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 PGBD4Q96DM1 585 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 TNIP3Q96KP6 325 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 PPP1R10Q96QC0 940 aaKnown RBP13.89□□□□□ -0.19
PRDM11-204ENST00000530656 MRPL45Q9BRJ2 306 aaKnown RBP13.89□□□□□ -0.19
PRDM11-204ENST00000530656 TRIM7Q9C029 511 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 RNF39Q9H2S5 420 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 UBN1Q9NPG3 1134 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 TSPAN16Q9UKR8 245 aa13.89□□□□□ -0.19
PRDM11-204ENST00000530656 A8MXQ7 604 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 PPEF2O14830 753 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 FSCN2O14926 492 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 ZNF623O75123 536 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 HSPA8P11142 646 aaKnown RBP13.88□□□□□ -0.19
PRDM11-204ENST00000530656 COPS2P61201 443 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 ORC1Q13415 861 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 SOWAHAQ2M3V2 549 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 GOLGA7BQ2TAP0 167 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 CYP4A22Q5TCH4 519 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 LLGL2Q6P1M3 1020 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 FAM43BQ6ZT52 329 aaPredicted RBP13.88□□□□□ -0.19
PRDM11-204ENST00000530656 POLNQ7Z5Q5 900 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 MRPL10Q7Z7H8 261 aaKnown RBP13.88□□□□□ -0.19
PRDM11-204ENST00000530656 XYLT1Q86Y38 959 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 RCOR2Q8IZ40 523 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 ARRDC4Q8NCT1 418 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 MAGOHBQ96A72 148 aaKnown RBP13.88□□□□□ -0.19
PRDM11-204ENST00000530656 MCRS1Q96EZ8 462 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 DDX27Q96GQ7 796 aaKnown RBP13.88□□□□□ -0.19
PRDM11-204ENST00000530656 CPXM1Q96SM3 734 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 HMX1Q9NP08 348 aaPredicted RBP13.88□□□□□ -0.19
PRDM11-204ENST00000530656 CYLDQ9NQC7 956 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 PCYOX1Q9UHG3 505 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 USTQ9Y2C2 406 aa13.88□□□□□ -0.19
PRDM11-204ENST00000530656 GOLGA8SH3BPF8 625 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 PODXLO00592 558 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 SASH3O75995 380 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 INHAP05111 366 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 THP07101 528 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 KRT7P08729 469 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 WARSP23381 471 aaKnown RBP13.87□□□□□ -0.19
PRDM11-204ENST00000530656 RPL9P32969 192 aaKnown RBP13.87□□□□□ -0.19
PRDM11-204ENST00000530656 GNL1P36915 607 aaPredicted RBP13.87□□□□□ -0.19
PRDM11-204ENST00000530656 RPL7AP62424 266 aaKnown RBP13.87□□□□□ -0.19
PRDM11-204ENST00000530656 HADHQ16836 314 aaKnown RBP13.87□□□□□ -0.19
PRDM11-204ENST00000530656 HSP90B2PQ58FF3 399 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 SYDE1Q6ZW31 735 aaPredicted RBP13.87□□□□□ -0.19
PRDM11-204ENST00000530656 LIMS2Q7Z4I7 341 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 ZDHHC17Q8IUH5 632 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 CCDC50Q8IVM0 306 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 CRYBG2Q8N1P7 616 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 GRK7Q8WTQ7 553 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 IFT81Q8WYA0 676 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 SEC14L1Q92503 715 aa13.87□□□□□ -0.19
PRDM11-204ENST00000530656 WNT8BQ93098 351 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms