RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 CHRM3P20309 590 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 UGP2Q16851 508 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 CAPRIN2Q6IMN6 1127 aaKnown RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 FKBP9P1Q75LS8 142 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 C11orf96Q7Z7L8 435 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 ZNF677Q86XU0 584 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 STKLD1Q8NE28 680 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 ENGASEQ8NFI3 743 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 KRT35Q92764 455 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 SGSM3Q96HU1 749 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 GPR63Q9BZJ6 419 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 ANKEF1Q9NU02 776 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 GPATCH2LQ9NWQ4 482 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 PCDHB8Q9UN66 801 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 PRG3Q9Y2Y8 225 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 MAN1A2O60476 641 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 PMPCBO75439 489 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 RHOBTB1O94844 696 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 VTNP04004 478 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 ICAM1P05362 532 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 PGK2P07205 417 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 FAM200BP0CF97 657 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 PTGER2P43116 358 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 BTKQ06187 659 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 DNAL1Q4LDG9 190 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 AARS2Q5JTZ9 985 aaKnown RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 EFHC1Q5JVL4 640 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 DCP1BQ8IZD4 617 aaKnown RBP8.47□□□□□ -1.05
CTNND1-220ENST00000529526 PGBD3Q8N328 593 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 ELMO3Q96BJ8 720 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 ABHD8Q96I13 439 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 WNK4Q96J92 1243 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 MKNK1Q9BUB5 465 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 POLLQ9UGP5 575 aa8.47□□□□□ -1.05
CTNND1-220ENST00000529526 ZNF189O75820 626 aaPredicted RBP8.46□□□□□ -1.05
CTNND1-220ENST00000529526 CELF2O95319 508 aaKnown RBP8.46□□□□□ -1.05
CTNND1-220ENST00000529526 PTPAQ15257 358 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 GLB1LQ6UWU2 654 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 BTNL9Q6UXG8 535 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 MMGT1Q8N4V1 131 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 DAGLBQ8NCG7 672 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 E2F7Q96AV8 911 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 EME1Q96AY2 570 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 ERGIC2Q96RQ1 377 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 C17orf102A2RUQ5 167 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 RASSF10A6NK89 507 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 YY1P25490 414 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 SOAT1P35610 550 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 HARS2P49590 506 aaKnown RBP8.46□□□□□ -1.05
CTNND1-220ENST00000529526 TAF6P49848 677 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 GNASQ5JWF2 1037 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 STYK1Q6J9G0 422 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 TRIM65Q6PJ69 517 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 ACOT1Q86TX2 421 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 SLC13A5Q86YT5 568 aaPredicted RBP8.46□□□□□ -1.05
CTNND1-220ENST00000529526 REXO1L1PQ8IX06 675 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 AGGF1Q8N302 714 aaeCLIP8.46□□□□□ -1.05
CTNND1-220ENST00000529526 CATSPER1Q8NEC5 780 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 ANKRD7Q92527 254 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 ZSWIM1Q9BR11 485 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 PKD2L2Q9NZM6 624 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.46□□□□□ -1.05
CTNND1-220ENST00000529526 CDV3Q9UKY7 258 aaKnown RBP8.46□□□□□ -1.05
CTNND1-220ENST00000529526 JCADQ9P266 1359 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 DLC1Q96QB1 1528 aa8.46□□□□□ -1.05
CTNND1-220ENST00000529526 TRIM49D1C9J1S8 452 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 P4HA2O15460 535 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 CAND2O75155 1236 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 VCAM1P19320 739 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 TARSP26639 723 aaKnown RBP8.46□□□□□ -1.06
CTNND1-220ENST00000529526 PCSK1P29120 753 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 EPHB2P29323 1055 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 TOB1P50616 345 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-220ENST00000529526 SOX10P56693 466 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 SNRPFP62306 86 aaKnown RBP8.46□□□□□ -1.06
CTNND1-220ENST00000529526 TROAPQ12815 778 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 DNAJC3Q13217 504 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 INTS5Q6P9B9 1019 aaKnown RBP8.46□□□□□ -1.06
CTNND1-220ENST00000529526 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.46□□□□□ -1.063e-6■■■■■ 50.8
CTNND1-220ENST00000529526 SYN2Q92777 582 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-220ENST00000529526 PRMT6Q96LA8 375 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-220ENST00000529526 SEMA6BQ9H3T3 888 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.46□□□□□ -1.063e-7■■□□□ 14.4
CTNND1-220ENST00000529526 MTO1Q9Y2Z2 717 aaKnown RBP8.46□□□□□ -1.06
CTNND1-220ENST00000529526 PTPRMP28827 1452 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 A0A087X0T9 212 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 NCF1BA6NI72 391 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-220ENST00000529526 NCF1CA8MVU1 366 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-220ENST00000529526 IGF2BP3O00425 579 aaKnown RBP eCLIP8.46□□□□□ -1.06
CTNND1-220ENST00000529526 ADCY3O60266 1144 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 FAM228BP0C875 321 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 UBTFL6P0CB48 400 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-220ENST00000529526 NCF1P14598 390 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-220ENST00000529526 KCNA4P22459 653 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 PTPN7P35236 360 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 THPOP40225 353 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 CPT1AP50416 773 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 CLCN3P51790 818 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 PLIN5Q00G26 463 aa8.46□□□□□ -1.06
CTNND1-220ENST00000529526 FUT11Q495W5 492 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms