RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 KIF12Q96FN5 646 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 SNX27Q96L92 541 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 OSBPL7Q9BZF2 842 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 NOD2Q9HC29 1040 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 AGAP1Q9UPQ3 857 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 C15orf41Q9Y2V0 281 aa17.69■□□□□ 0.42
CAPRIN1-207ENST00000529307 TRPA1O75762 1119 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 DNAJC8O75937 253 aaPredicted RBP17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 RTN3O95197 1032 aaPredicted RBP17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 RRM1P23921 792 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 PAFAH1B1P43034 410 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 MRPS25P82663 173 aaKnown RBP17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 PCBP1Q15365 356 aaKnown RBP eCLIP17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 DCAF12L1Q5VU92 463 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 C11orf63Q6NUN7 778 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 MON1BQ7L1V2 547 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 NME8Q8N427 588 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 MMGT1Q8N4V1 131 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 CAVIN3Q969G5 261 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 XPNPEP3Q9NQH7 507 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 DPP3Q9NY33 737 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 RNF14Q9UBS8 474 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 CITO14578 2027 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 TMEM110-MUSTN1A8MSY1 372 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 CES2O00748 559 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 SCTRP47872 440 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 MESDQ14696 234 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 MFN1Q8IWA4 741 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 SH2D3CQ8N5H7 860 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 CD99L2Q8TCZ2 262 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 WHAMMQ8TF30 809 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 PBKQ96KB5 322 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 TRIM7Q9C029 511 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 VRTNQ9H8Y1 702 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 HMGXB4Q9UGU5 601 aa17.68■□□□□ 0.42
CAPRIN1-207ENST00000529307 NR1D1P20393 614 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 AKAP5P24588 427 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 NSFP46459 744 aaKnown RBP17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 SEC24CP53992 1094 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 PTP4A2Q12974 167 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 ORC1Q13415 861 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 CCSAPQ6IQ19 270 aaPredicted RBP17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 ALKAL1Q6UXT8 129 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 C1orf131Q8NDD1 294 aaKnown RBP17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 CCHCR1Q8TD31 782 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 ALG3Q92685 438 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 HPDLQ96IR7 371 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 TWNKQ96RR1 684 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 CELF4Q9BZC1 486 aaKnown RBP17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 RNF39Q9H2S5 420 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 CREBZFQ9NS37 354 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 ITGA11Q9UKX5 1188 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 TRIP11Q15643 1979 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 PPEF2O14830 753 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 CEP104O60308 925 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 RECQL4O94761 1208 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 ASGR1P07306 291 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 AXLP30530 894 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 ZBTB6Q15916 424 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 KCNA10Q16322 511 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 GLRA4Q5JXX5 417 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 TAF2Q6P1X5 1199 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 TRIM72Q6ZMU5 477 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 CD302Q8IX05 232 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 TSEN2Q8NCE0 465 aaKnown RBP17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 KLHDC9Q8NEP7 349 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 HDAC7Q8WUI4 952 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 C18orf25Q96B23 403 aaPredicted RBP17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 C11orf70Q9BRQ4 267 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 LRRC1Q9BTT6 524 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 APOL6Q9BWW8 343 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 PLEKHA5Q9HAU0 1116 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 SPC25Q9HBM1 224 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 UVRAGQ9P2Y5 699 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 TUBGCP4Q9UGJ1 667 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 SRRDQ9UH36 339 aa17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 NOC2LQ9Y3T9 749 aaKnown RBP17.67■□□□□ 0.42
CAPRIN1-207ENST00000529307 CASP8AP2Q9UKL3 1982 aa17.66■□□□□ 0.42
CAPRIN1-207ENST00000529307 E7EVH7 732 aa17.66■□□□□ 0.42
CAPRIN1-207ENST00000529307 COMTP21964 271 aa17.66■□□□□ 0.42
CAPRIN1-207ENST00000529307 ATICP31939 592 aa17.66■□□□□ 0.42
CAPRIN1-207ENST00000529307 MARCKSL1P49006 195 aa17.66■□□□□ 0.42
CAPRIN1-207ENST00000529307 MYO1EQ12965 1108 aa17.66■□□□□ 0.42
CAPRIN1-207ENST00000529307 THEMIS2Q5TEJ8 643 aa17.66■□□□□ 0.42
CAPRIN1-207ENST00000529307 SLC30A9Q6PML9 568 aa17.66■□□□□ 0.42
CAPRIN1-207ENST00000529307 NT5DC4Q86YG4 428 aa17.66■□□□□ 0.42
CAPRIN1-207ENST00000529307 USP38Q8NB14 1042 aa17.66■□□□□ 0.42
CAPRIN1-207ENST00000529307 KRT35Q92764 455 aa17.66■□□□□ 0.42
CAPRIN1-207ENST00000529307 AVENQ9NQS1 362 aaPredicted RBP17.66■□□□□ 0.42
CAPRIN1-207ENST00000529307 RAD23BP54727 409 aa17.65■□□□□ 0.42
CAPRIN1-207ENST00000529307 ELF3P78545 371 aaPredicted RBP17.65■□□□□ 0.42
CAPRIN1-207ENST00000529307 FAM47CQ5HY64 1035 aa17.65■□□□□ 0.42
CAPRIN1-207ENST00000529307 KCTD16Q68DU8 428 aa17.65■□□□□ 0.42
CAPRIN1-207ENST00000529307 PHF13Q86YI8 300 aaPredicted RBP17.65■□□□□ 0.42
CAPRIN1-207ENST00000529307 RASGEF1CQ8N431 466 aa17.65■□□□□ 0.42
CAPRIN1-207ENST00000529307 WDTC1Q8N5D0 677 aa17.65■□□□□ 0.42
CAPRIN1-207ENST00000529307 ACTRT1Q8TDG2 376 aa17.65■□□□□ 0.42
CAPRIN1-207ENST00000529307 STAMBPL1Q96FJ0 436 aa17.65■□□□□ 0.42
CAPRIN1-207ENST00000529307 ZIM3Q96PE6 472 aa17.65■□□□□ 0.42
CAPRIN1-207ENST00000529307 HINFPQ9BQA5 517 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms