RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 PTPRDP23468 1912 aa12.94□□□□□ -0.34
COPB1-206ENST00000529210 OBSL1O75147 1896 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 SHISA7A6NL88 538 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 H0Y858 1186 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 ARNTLO00327 626 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 MAPK13O15264 365 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 SOAT2O75908 522 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 KIF20AO95235 890 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 CST3P01034 146 aaPredicted RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 RPN1P04843 607 aaKnown RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 GLULP15104 373 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 HMGA1P17096 107 aaKnown RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 GJA1P17302 382 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 WARSP23381 471 aaKnown RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 ATICP31939 592 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 MAGEA11P43364 429 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 CYP2J2P51589 502 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 AP3M2P53677 418 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 MCCD1P59942 119 aaPredicted RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 DPYDQ12882 1025 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 SNW1Q13573 536 aaKnown RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 KCNB1Q14721 858 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 ALYREFQ86V81 257 aaKnown RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 OSTM1Q86WC4 334 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 RDH13Q8NBN7 331 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 ST13P5Q8NFI4 369 aaPredicted RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 PARD3BQ8TEW8 1205 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 NOC3LQ8WTT2 800 aaKnown RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 ZNF516Q92618 1163 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 TRMT2BQ96GJ1 504 aaKnown RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 CHAMP1Q96JM3 812 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 FAM84AQ96KN4 292 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 MYRFLQ96LU7 910 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 NELL2Q99435 816 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 SEPT5Q99719 369 aaPredicted RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 LPIN3Q9BQK8 851 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 TRMT61BQ9BVS5 477 aaKnown RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 ABI2Q9NYB9 513 aaPredicted RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 CDH9Q9ULB4 789 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 TRAF3IP3Q9Y228 551 aa12.93□□□□□ -0.34
COPB1-206ENST00000529210 R3HCC1Q9Y3T6 440 aaKnown RBP12.93□□□□□ -0.34
COPB1-206ENST00000529210 NCANO14594 1321 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 VPS13AQ96RL7 3174 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 F5P12259 2224 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 HEPACAM2A8MVW5 462 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 CHADO15335 359 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 EXOC3O60645 756 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 F11P03951 625 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 CSH1P0DML2 217 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 CSH2P0DML3 217 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 DLATP10515 647 aaKnown RBP12.92□□□□□ -0.34
COPB1-206ENST00000529210 TNNI1P19237 187 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 RFX1P22670 979 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 DDX6P26196 483 aaKnown RBP eCLIP12.92□□□□□ -0.343e-6■■■□□ 19.2
COPB1-206ENST00000529210 GABRR2P28476 465 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 RPS9P46781 194 aaKnown RBP12.92□□□□□ -0.34
COPB1-206ENST00000529210 NUCB2P80303 420 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 ENPEPQ07075 957 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 ANGPT1Q15389 498 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 MAPRE1Q15691 268 aaKnown RBP12.92□□□□□ -0.34
COPB1-206ENST00000529210 ARHGAP15Q53QZ3 475 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 KRBA2Q6ZNG9 492 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 TMEM150AQ86TG1 271 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 ZNF687Q8N1G0 1237 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 PLEKHO2Q8TD55 490 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 ATOH1Q92858 354 aaPredicted RBP12.92□□□□□ -0.34
COPB1-206ENST00000529210 CLDN23Q96B33 292 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 MSANTD3Q96H12 275 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 PHOX2BQ99453 314 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 XYLT2Q9H1B5 865 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 ATXN3LQ9H3M9 355 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 TASP1Q9H6P5 420 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 LTB4R2Q9NPC1 389 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 GTF3C4Q9UKN8 822 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 PATJQ8NI35 1801 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 GREB1Q4ZG55 1949 aa12.92□□□□□ -0.34
COPB1-206ENST00000529210 FANCMQ8IYD8 2048 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 STK25O00506 426 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 MAN2B1O00754 1011 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 NOL4O94818 638 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 ZNF202O95125 648 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 C4BPAP04003 597 aaKnown RBP12.91□□□□□ -0.34
COPB1-206ENST00000529210 RPL10AP62906 217 aaKnown RBP12.91□□□□□ -0.34
COPB1-206ENST00000529210 STXBP5Q5T5C0 1151 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 C1orf228Q6PIY5 440 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 VSTM1Q6UX27 236 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 ZNF852Q6ZMS4 543 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 MAMSTRQ6ZN01 415 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 C4orf50Q6ZRC1 276 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 ARID3BQ8IVW6 561 aaPredicted RBP12.91□□□□□ -0.34
COPB1-206ENST00000529210 GUF1Q8N442 669 aaKnown RBP12.91□□□□□ -0.34
COPB1-206ENST00000529210 FSIP1Q8NA03 581 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 TMC2Q8TDI7 906 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 CCDC47Q96A33 483 aaKnown RBP12.91□□□□□ -0.34
COPB1-206ENST00000529210 SYAP1Q96A49 352 aaPredicted RBP12.91□□□□□ -0.34
COPB1-206ENST00000529210 CCDC127Q96BQ5 260 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 GCNAQ96QF7 691 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 SYT15Q9BQS2 421 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 FOXQ1Q9C009 403 aa12.91□□□□□ -0.34
COPB1-206ENST00000529210 GOLPH3LQ9H4A5 285 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms