RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 HMGA1P17096 107 aaKnown RBP20.55■□□□□ 0.88
SSRP1-204ENST00000529002 PPP2R3AQ06190 1150 aa20.55■□□□□ 0.88
SSRP1-204ENST00000529002 ENOX2Q16206 610 aaKnown RBP20.55■□□□□ 0.88
SSRP1-204ENST00000529002 CC2D1AQ6P1N0 951 aaPredicted RBP20.55■□□□□ 0.88
SSRP1-204ENST00000529002 TSTD1Q8NFU3 115 aa20.55■□□□□ 0.88
SSRP1-204ENST00000529002 FAM212AQ96EL1 285 aa20.55■□□□□ 0.88
SSRP1-204ENST00000529002 ECT2Q9H8V3 914 aa20.55■□□□□ 0.88
SSRP1-204ENST00000529002 ABI2Q9NYB9 513 aaPredicted RBP20.55■□□□□ 0.88
SSRP1-204ENST00000529002 HSFX1Q9UBD0 423 aa20.55■□□□□ 0.88
SSRP1-204ENST00000529002 DNM3Q9UQ16 869 aa20.55■□□□□ 0.88
SSRP1-204ENST00000529002 HAPLN1P10915 354 aaPredicted RBP20.54■□□□□ 0.88
SSRP1-204ENST00000529002 MAPK8P45983 427 aa20.54■□□□□ 0.88
SSRP1-204ENST00000529002 SEC13P55735 322 aa20.54■□□□□ 0.88
SSRP1-204ENST00000529002 JADE1Q6IE81 842 aa20.54■□□□□ 0.88
SSRP1-204ENST00000529002 ANO7Q6IWH7 933 aa20.54■□□□□ 0.88
SSRP1-204ENST00000529002 FRMD1Q8N878 549 aa20.54■□□□□ 0.88
SSRP1-204ENST00000529002 CD101Q93033 1021 aa20.54■□□□□ 0.88
SSRP1-204ENST00000529002 SLC22A12Q96S37 553 aa20.54■□□□□ 0.88
SSRP1-204ENST00000529002 NTPCRQ9BSD7 190 aaKnown RBP20.54■□□□□ 0.88
SSRP1-204ENST00000529002 MAGED2Q9UNF1 606 aaPredicted RBP20.54■□□□□ 0.88
SSRP1-204ENST00000529002 WNT6Q9Y6F9 365 aa20.54■□□□□ 0.88
SSRP1-204ENST00000529002 HELZP42694 1942 aaKnown RBP20.53■□□□□ 0.88
SSRP1-204ENST00000529002 FBXO43Q4G163 708 aa20.53■□□□□ 0.88
SSRP1-204ENST00000529002 SPATA1Q5VX52 437 aa20.53■□□□□ 0.88
SSRP1-204ENST00000529002 C9orf57Q5W0N0 161 aa20.53■□□□□ 0.88
SSRP1-204ENST00000529002 ZPBP2Q6X784 338 aa20.53■□□□□ 0.88
SSRP1-204ENST00000529002 ARMCX6Q7L4S7 300 aa20.53■□□□□ 0.88
SSRP1-204ENST00000529002 TTC30AQ86WT1 665 aa20.53■□□□□ 0.88
SSRP1-204ENST00000529002 CCDC33Q8N5R6 958 aa20.53■□□□□ 0.88
SSRP1-204ENST00000529002 RLN3Q8WXF3 142 aa20.53■□□□□ 0.88
SSRP1-204ENST00000529002 BICD1Q96G01 975 aa20.53■□□□□ 0.88
SSRP1-204ENST00000529002 CYP2S1Q96SQ9 504 aa20.53■□□□□ 0.88
SSRP1-204ENST00000529002 FSCN3Q9NQT6 498 aa20.53■□□□□ 0.88
SSRP1-204ENST00000529002 TMLHEQ9NVH6 421 aa20.53■□□□□ 0.88
SSRP1-204ENST00000529002 NPHP3-ACAD11A0A0J9YXS1 232 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 FAM189A1O60320 539 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 TADA3O75528 432 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 NFICP08651 508 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 PLS3P13797 630 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 HNRNPLP14866 589 aaKnown RBP eCLIP20.52■□□□□ 0.88
SSRP1-204ENST00000529002 AMPD2Q01433 879 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 MTF1Q14872 753 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 SAFBQ15424 915 aaKnown RBP eCLIP20.52■□□□□ 0.88
SSRP1-204ENST00000529002 ZRSR1Q15695 479 aaKnown RBP20.52■□□□□ 0.88
SSRP1-204ENST00000529002 IL17AQ16552 155 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 USP39Q53GS9 565 aaKnown RBP20.52■□□□□ 0.88
SSRP1-204ENST00000529002 C2orf27AQ580R0 203 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 TRIM61Q5EBN2 209 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 CPA6Q8N4T0 437 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 IGSF22Q8N9C0 903 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 SPIRE2Q8WWL2 714 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 ACDQ96AP0 544 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 MMTAG2Q9BU76 263 aaKnown RBP20.52■□□□□ 0.88
SSRP1-204ENST00000529002 TMEM74BQ9NUR3 256 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 DUS2Q9NX74 493 aaKnown RBP20.52■□□□□ 0.88
SSRP1-204ENST00000529002 NEUROG3Q9Y4Z2 214 aa20.52■□□□□ 0.88
SSRP1-204ENST00000529002 PIRO00625 290 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 CYP11A1P05108 521 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 PDGFRLQ15198 375 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 WSCD1Q658N2 575 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 C19orf48Q6RUI8 117 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 MON1AQ86VX9 555 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 MDGA1Q8NFP4 955 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 USP33Q8TEY7 942 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 PLIN2Q99541 437 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 PI4K2AQ9BTU6 479 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 LINC00597Q9H2U6 94 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 RPF1Q9H9Y2 349 aaKnown RBP20.51■□□□□ 0.87
SSRP1-204ENST00000529002 KIF9Q9HAQ2 790 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 C17orf75Q9HAS0 396 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 MSRB2Q9Y3D2 182 aa20.51■□□□□ 0.87
SSRP1-204ENST00000529002 ATXN2Q99700 1313 aaKnown RBP20.51■□□□□ 0.87
SSRP1-204ENST00000529002 NBEAQ8NFP9 2946 aa20.5■□□□□ 0.87
SSRP1-204ENST00000529002 CYB561D2O14569 222 aa20.5■□□□□ 0.87
SSRP1-204ENST00000529002 XPOTO43592 962 aaKnown RBP20.5■□□□□ 0.87
SSRP1-204ENST00000529002 FAM193AP78312 1265 aa20.5■□□□□ 0.87
SSRP1-204ENST00000529002 SIM1P81133 766 aaPredicted RBP20.5■□□□□ 0.87
SSRP1-204ENST00000529002 ORC2Q13416 577 aaPredicted RBP20.5■□□□□ 0.87
SSRP1-204ENST00000529002 ANKRD1Q15327 319 aa20.5■□□□□ 0.87
SSRP1-204ENST00000529002 ZNF77Q15935 545 aa20.5■□□□□ 0.87
SSRP1-204ENST00000529002 EML3Q32P44 896 aa20.5■□□□□ 0.87
SSRP1-204ENST00000529002 ZC2HC1CQ53FD0 456 aaPredicted RBP20.5■□□□□ 0.87
SSRP1-204ENST00000529002 RASSF3Q86WH2 238 aa20.5■□□□□ 0.87
SSRP1-204ENST00000529002 SFTPA1Q8IWL2 248 aa20.5■□□□□ 0.87
SSRP1-204ENST00000529002 OSCP1Q8WVF1 389 aa20.5■□□□□ 0.87
SSRP1-204ENST00000529002 MRPS31Q92665 395 aaKnown RBP20.5■□□□□ 0.87
SSRP1-204ENST00000529002 PYM1Q9BRP8 204 aaKnown RBP20.5■□□□□ 0.87
SSRP1-204ENST00000529002 TRPC7Q9HCX4 862 aa20.5■□□□□ 0.87
SSRP1-204ENST00000529002 CIZ1Q9ULV3 898 aaPredicted RBP20.5■□□□□ 0.87
SSRP1-204ENST00000529002 PLXNB3Q9ULL4 1909 aa20.49■□□□□ 0.87
SSRP1-204ENST00000529002 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.49■□□□□ 0.87
SSRP1-204ENST00000529002 ANO9A1A5B4 782 aa20.49■□□□□ 0.87
SSRP1-204ENST00000529002 K7EQS6 105 aa20.49■□□□□ 0.87
SSRP1-204ENST00000529002 GUCY2CP25092 1073 aa20.49■□□□□ 0.87
SSRP1-204ENST00000529002 DDX6P26196 483 aaKnown RBP eCLIP20.49■□□□□ 0.87
SSRP1-204ENST00000529002 PTGER3P43115 390 aa20.49■□□□□ 0.87
SSRP1-204ENST00000529002 IFNAR2P48551 515 aa20.49■□□□□ 0.87
SSRP1-204ENST00000529002 PDIA5Q14554 519 aa20.49■□□□□ 0.87
SSRP1-204ENST00000529002 TMEM92Q6UXU6 159 aa20.49■□□□□ 0.87
SSRP1-204ENST00000529002 TMEFF1Q8IYR6 380 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms