RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 MFSD6LQ8IWD5 586 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 YAF2Q8IY57 180 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 TMEM105Q8N8V8 129 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 ZSWIM2Q8NEG5 633 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 CXorf38Q8TB03 319 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 SYAP1Q96A49 352 aaPredicted RBP10.3□□□□□ -0.76
CHD7-208ENST00000528280 TCEAL4Q96EI5 215 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 FUBP3Q96I24 572 aaKnown RBP eCLIP10.3□□□□□ -0.76
CHD7-208ENST00000528280 CGRRF1Q99675 332 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 SEPT5Q99719 369 aaPredicted RBP10.3□□□□□ -0.76
CHD7-208ENST00000528280 KXD1Q9BQD3 176 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 RPP25Q9BUL9 199 aaKnown RBP10.3□□□□□ -0.76
CHD7-208ENST00000528280 LRRC3Q9BY71 257 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 MTMR12Q9C0I1 747 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 ATXN3LQ9H3M9 355 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 SLITRK6Q9H5Y7 841 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 BRD9Q9H8M2 597 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 OBP2AQ9NY56 170 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 UXTQ9UBK9 157 aaPredicted RBP10.3□□□□□ -0.76
CHD7-208ENST00000528280 CDH9Q9ULB4 789 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 FRMD4BQ9Y2L6 1034 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 CEP250Q9BV73 2442 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 CHD8Q9HCK8 2581 aa10.3□□□□□ -0.76
CHD7-208ENST00000528280 FRYLO94915 3013 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 DOCK8Q8NF50 2099 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 KANSL1LA0AUZ9 987 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 IKBKBO14920 756 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 ZNF263O14978 683 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 MAPK13O15264 365 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 RHOBTB3O94955 611 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 ZNF202O95125 648 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 VNN2O95498 520 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 P4HA1P13674 534 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 TRIM21P19474 475 aaKnown RBP10.29□□□□□ -0.76
CHD7-208ENST00000528280 CASP1P29466 404 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 GNL1P36915 607 aaPredicted RBP10.29□□□□□ -0.76
CHD7-208ENST00000528280 TNNC1P63316 161 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 ENPEPQ07075 957 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 SNW1Q13573 536 aaKnown RBP10.29□□□□□ -0.76
CHD7-208ENST00000528280 PUM1Q14671 1186 aaKnown RBP eCLIP10.29□□□□□ -0.76
CHD7-208ENST00000528280 KCNB1Q14721 858 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 MLF2Q15773 248 aaPredicted RBP10.29□□□□□ -0.76
CHD7-208ENST00000528280 SOWAHAQ2M3V2 549 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 INTS6LQ5JSJ4 861 aaKnown RBP10.29□□□□□ -0.76
CHD7-208ENST00000528280 ZNF852Q6ZMS4 543 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 KRBA2Q6ZNG9 492 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 LIMS2Q7Z4I7 341 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 LRRTM3Q86VH5 581 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 SPATA2LQ8IUW3 424 aaPredicted RBP10.29□□□□□ -0.76
CHD7-208ENST00000528280 CCDC105Q8IYK2 499 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 ADGRF2Q8IZF7 708 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 TMEM130Q8N3G9 435 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 FSIP1Q8NA03 581 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 DTWD2Q8NBA8 298 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 OR5B17Q8NGF7 314 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 ZSCAN18Q8TBC5 510 aaPredicted RBP10.29□□□□□ -0.76
CHD7-208ENST00000528280 CCDC127Q96BQ5 260 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 MSANTD3Q96H12 275 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 TMEM209Q96SK2 561 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 MMS19Q96T76 1030 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 BCO2Q9BYV7 579 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 DNAI2Q9GZS0 605 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 SNX25Q9H3E2 840 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 TASP1Q9H6P5 420 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 TBC1D17Q9HA65 648 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 DMAC2Q9NW81 257 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 RMND1Q9NWS8 449 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 THG1LQ9NWX6 298 aaKnown RBP10.29□□□□□ -0.76
CHD7-208ENST00000528280 ABI2Q9NYB9 513 aaPredicted RBP10.29□□□□□ -0.76
CHD7-208ENST00000528280 MAGEC2Q9UBF1 373 aaPredicted RBP10.29□□□□□ -0.76
CHD7-208ENST00000528280 SIX4Q9UIU6 781 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 L1RE1Q9UN81 338 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 TRAF3IP3Q9Y228 551 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 ANK1P16157 1881 aa10.29□□□□□ -0.76
CHD7-208ENST00000528280 ATRXP46100 2492 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 SCN1AP35498 2009 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 DOCK6Q96HP0 2047 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 A0A1W2PRU2 124 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 CHADO15335 359 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 PI15O43692 258 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 TACC1O75410 805 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 MOSPD3O75425 235 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 CST3P01034 146 aaPredicted RBP10.28□□□□□ -0.76
CHD7-208ENST00000528280 WARSP23381 471 aaKnown RBP10.28□□□□□ -0.76
CHD7-208ENST00000528280 GABRR2P28476 465 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 ANP32AP39687 249 aaKnown RBP10.28□□□□□ -0.76
CHD7-208ENST00000528280 CCR2P41597 374 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 MAGEA11P43364 429 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 WNT7BP56706 349 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 CLDN10P78369 228 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 TEAD2Q15562 447 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 NFIL3Q16649 462 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 SGSM1Q2NKQ1 1148 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 WDR72Q3MJ13 1102 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 CFAP221Q4G0U5 840 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 CWF19L1Q69YN2 538 aaKnown RBP10.28□□□□□ -0.76
CHD7-208ENST00000528280 FAM171BQ6P995 826 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 VSTM1Q6UX27 236 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 TMC8Q8IU68 726 aa10.28□□□□□ -0.76
CHD7-208ENST00000528280 ARID3BQ8IVW6 561 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms