RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 U2AF2P26368 475 aaKnown RBP eCLIP17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 MCM7P33993 719 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 HOXD12P35452 270 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 P2RY2P41231 377 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 FXR2P51116 673 aaKnown RBP eCLIP17.61■□□□□ 0.412e-8■■□□□ 13.1
CHMP4A-203ENST00000527154 SIM1P81133 766 aaPredicted RBP17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 BFSP1Q12934 665 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 USP4Q13107 963 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 UAP1L1Q3KQV9 507 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 SPATA1Q5VX52 437 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 ARMCX5Q6P1M9 558 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 C1orf186Q6ZWK4 172 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 SYT12Q8IV01 421 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 CPA6Q8N4T0 437 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 MAB21L3Q8N8X9 362 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 TMEM161BQ8NDZ6 487 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 SPPL2BQ8TCT7 592 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 TPSD1Q9BZJ3 242 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 KMT5AQ9NQR1 393 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 INVSQ9Y283 1065 aa17.61■□□□□ 0.41
CHMP4A-203ENST00000527154 K7EQS6 105 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 ODC1P11926 461 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 NMT1P30419 496 aaKnown RBP17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 FAM160A1Q05DH4 1040 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 SPAG1Q07617 926 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 MTF1Q14872 753 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 CRY1Q16526 586 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 ZNF423Q2M1K9 1284 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 GAB4Q2WGN9 574 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 EML3Q32P44 896 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 MGAT5BQ3V5L5 792 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 DSTYKQ6XUX3 929 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 LRRTM3Q86VH5 581 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 PIGKQ92643 395 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 DRC1Q96MC2 740 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 SEPT5Q99719 369 aaPredicted RBP17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 NUSAP1Q9BXS6 441 aaKnown RBP17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 CCSER1Q9C0I3 900 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 CACNA2D2Q9NY47 1150 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 MMP17Q9ULZ9 603 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 PLXND1Q9Y4D7 1925 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 PI4KAP42356 2102 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 APC2O95996 2303 aa17.6■□□□□ 0.41
CHMP4A-203ENST00000527154 ACACAQ13085 2346 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 GON4LQ3T8J9 2241 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 PCDH15Q96QU1 1955 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 ANO9A1A5B4 782 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 PIRO00625 290 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 MAPTP10636 758 aaKnown RBP17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 HNRNPLP14866 589 aaKnown RBP eCLIP17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 DPP6P42658 865 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 GUCY2FP51841 1108 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 FAM193AP78312 1265 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 SLC39A12Q504Y0 691 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 TXNDC8Q6A555 127 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 RINT1Q6NUQ1 792 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 CHCHD4Q8N4Q1 142 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 C4orf32Q8N8J7 132 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 ATP2A3Q93084 1043 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 BBC3Q96PG8 261 aaPredicted RBP17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 RUSC1Q9BVN2 902 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 ANKFY1Q9P2R3 1169 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 PILRBQ9UKJ0 227 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 KIAA1024Q9UPX6 916 aa17.59■□□□□ 0.41
CHMP4A-203ENST00000527154 ANTXRLA6NF34 631 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 SLC16A4O15374 487 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 CLDN3O15551 220 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 XPOTO43592 962 aaKnown RBP17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 HARSP12081 509 aaKnown RBP17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 GUCY2CP25092 1073 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 CCT6AP40227 531 aaKnown RBP17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 OPRD1P41143 372 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 TNFSF9P41273 254 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 PTGER3P43115 390 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 DHPSP49366 369 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 IRX6P78412 446 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 ENOX2Q16206 610 aaKnown RBP17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 C9orf57Q5W0N0 161 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 ANO7Q6IWH7 933 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 CC2D1AQ6P1N0 951 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 CENPQQ7L2Z9 268 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 IGSF22Q8N9C0 903 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 NSUN7Q8NE18 718 aaKnown RBP17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 TRMT2BQ96GJ1 504 aaKnown RBP17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 MYRFLQ96LU7 910 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 TIPINQ9BVW5 301 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 TMEM206Q9H813 350 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 CAPN10Q9HC96 672 aa17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 DDX19AQ9NUU7 478 aaKnown RBP17.58■□□□□ 0.4
CHMP4A-203ENST00000527154 LACTBL1A8MY62 500 aa17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 CDC25AP30304 524 aa17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 SCAPQ12770 1279 aa17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 HNRNPDQ14103 355 aaKnown RBP17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 PDIA5Q14554 519 aa17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 KYAT1Q16773 422 aa17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 MAP7D1Q3KQU3 841 aa17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 TMEM92Q6UXU6 159 aa17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 LPCAT2Q7L5N7 544 aa17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 GIPC2Q8TF65 315 aa17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 DUS2Q9NX74 493 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms