RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 STAT1P42224 750 aa17.59■□□□□ 0.41
CAPN1-205ENST00000526954 ROR1Q01973 937 aa17.59■□□□□ 0.41
CAPN1-205ENST00000526954 ZNF394Q53GI3 561 aa17.59■□□□□ 0.41
CAPN1-205ENST00000526954 TPGS2Q68CL5 300 aa17.59■□□□□ 0.41
CAPN1-205ENST00000526954 ZNF461Q8TAF7 563 aa17.59■□□□□ 0.41
CAPN1-205ENST00000526954 MYCBPAPQ8TBZ2 947 aa17.59■□□□□ 0.41
CAPN1-205ENST00000526954 MAFFQ9ULX9 164 aa17.59■□□□□ 0.41
CAPN1-205ENST00000526954 WDR27A2RRH5 827 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 MYBPHLA2RUH7 354 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 OR4Q2P0C623 313 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 CPB1P15086 417 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 CA8P35219 290 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 CLCN1P35523 988 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 FXR1P51114 621 aaKnown RBP eCLIP17.58■□□□□ 0.4
CAPN1-205ENST00000526954 BPIFB4P59827 614 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 PSMC1P62191 440 aaKnown RBP17.58■□□□□ 0.4
CAPN1-205ENST00000526954 ZBED6P86452 979 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 TBX2Q13207 712 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-205ENST00000526954 ORC1Q13415 861 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 NFE2Q16621 373 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-205ENST00000526954 SLC39A12Q504Y0 691 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 LILRA6Q6PI73 481 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 TMC6Q7Z403 805 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-205ENST00000526954 ADGRD2Q7Z7M1 963 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 PPFIBP1Q86W92 1011 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 FMNL3Q8IVF7 1028 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 C2orf15Q8WU43 125 aaKnown RBP17.58■□□□□ 0.4
CAPN1-205ENST00000526954 HEXIM2Q96MH2 286 aaKnown RBP17.58■□□□□ 0.4
CAPN1-205ENST00000526954 NUCKS1Q9H1E3 243 aaKnown RBP17.58■□□□□ 0.4
CAPN1-205ENST00000526954 NSUN3Q9H649 340 aaKnown RBP17.58■□□□□ 0.4
CAPN1-205ENST00000526954 TMLHEQ9NVH6 421 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 GTF3C4Q9UKN8 822 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 MTCH2Q9Y6C9 303 aa17.58■□□□□ 0.4
CAPN1-205ENST00000526954 CYP26A1O43174 497 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 CLASP2O75122 1294 aaKnown RBP17.57■□□□□ 0.4
CAPN1-205ENST00000526954 CSPG5O95196 566 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 VDRP11473 427 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 KLRC2P26717 231 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 USP8P40818 1118 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 ARPP19P56211 112 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 ADGRE1Q14246 886 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 DUSP6Q16828 381 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 MDH1BQ5I0G3 518 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 RNF19BQ6ZMZ0 732 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 ZNF397Q8NF99 534 aaPredicted RBP17.57■□□□□ 0.4
CAPN1-205ENST00000526954 PPP2R3CQ969Q6 453 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 CDCA3Q99618 268 aaPredicted RBP17.57■□□□□ 0.4
CAPN1-205ENST00000526954 TLE6Q9H808 572 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 ABCB6Q9NP58 842 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 AIPL1Q9NZN9 384 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 HSFX1Q9UBD0 423 aa17.57■□□□□ 0.4
CAPN1-205ENST00000526954 AFF4Q9UHB7 1163 aaKnown RBP17.57■□□□□ 0.4
CAPN1-205ENST00000526954 LUC7L2Q9Y383 392 aaKnown RBP17.57■□□□□ 0.4
CAPN1-205ENST00000526954 CDH23Q9H251 3354 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 TGM5O43548 720 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 PNMA6AP0CW24 399 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-205ENST00000526954 ATF2P15336 505 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 CASP14P31944 242 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 CLCN4P51793 760 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 PTK2Q05397 1052 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 CCDC142Q17RM4 750 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 CFAP221Q4G0U5 840 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 SGO2Q562F6 1265 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 ARHGAP17Q68EM7 881 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 C4orf50Q6ZRC1 276 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 GLYCTKQ8IVS8 523 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 C12orf29Q8N999 325 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 SPPL2BQ8TCT7 592 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 SLC22A17Q8WUG5 538 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 CPLX3Q8WVH0 158 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 SYN2Q92777 582 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-205ENST00000526954 MYLPFQ96A32 169 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 CYFIP2Q96F07 1278 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 PCED1BQ96HM7 432 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 FUBP3Q96I24 572 aaKnown RBP eCLIP17.56■□□□□ 0.4
CAPN1-205ENST00000526954 FAM161BQ96MY7 647 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 GAS2L1Q99501 681 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-205ENST00000526954 HNRNPABQ99729 332 aaKnown RBP17.56■□□□□ 0.4
CAPN1-205ENST00000526954 LPIN3Q9BQK8 851 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 B3GNT5Q9BYG0 378 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 PCDHB5Q9Y5E4 795 aa17.56■□□□□ 0.4
CAPN1-205ENST00000526954 PRRC2BQ5JSZ5 2229 aaKnown RBP17.55■□□□□ 0.4
CAPN1-205ENST00000526954 MTMR11A4FU01 709 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 LRRC53A6NM62 1247 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 GFPT2O94808 682 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 VNN2O95498 520 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 GLUD1P00367 558 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 TPM1P09493 284 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 CCDC172P0C7W6 258 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 FERP16591 822 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 KCNC3Q14003 757 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 ARID5BQ14865 1188 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 STILQ15468 1287 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 PAQR9Q6ZVX9 377 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 Q7L0L9 218 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 RTL10Q7L3V2 364 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 PALB2Q86YC2 1186 aa17.55■□□□□ 0.4
CAPN1-205ENST00000526954 SPATA2LQ8IUW3 424 aaPredicted RBP17.55■□□□□ 0.4
CAPN1-205ENST00000526954 TCEAL8Q8IYN2 117 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms