RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 LRRTM3Q86VH5 581 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 UNC93AQ86WB7 457 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 MICALL1Q8N3F8 863 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 MRPL43Q8N983 215 aaKnown RBP14.61□□□□□ -0.07
CD44-224ENST00000526669 C12orf29Q8N999 325 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 B3GALNT2Q8NCR0 500 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 BAP1Q92560 729 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 MYLPFQ96A32 169 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 MRPL38Q96DV4 380 aaKnown RBP14.61□□□□□ -0.07
CD44-224ENST00000526669 TMEM176AQ96HP8 235 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 ACBD6Q9BR61 282 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 NUP58Q9BVL2 599 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 ZCWPW1Q9H0M4 648 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 RXFP1Q9HBX9 757 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.61□□□□□ -0.07
CD44-224ENST00000526669 FNIP2Q9P278 1114 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 GTF3C4Q9UKN8 822 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.61□□□□□ -0.07
CD44-224ENST00000526669 BACE2Q9Y5Z0 518 aa14.61□□□□□ -0.07
CD44-224ENST00000526669 NOTCH4Q99466 2003 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 LRRC53A6NM62 1247 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 CLDN5O00501 218 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 FAM163BP0C2L3 166 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 SPATA31D3P0C874 917 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 BRD2P25440 801 aaKnown RBP14.6□□□□□ -0.07
CD44-224ENST00000526669 KLRC2P26717 231 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 ADORA2BP29275 332 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 GTF2F1P35269 517 aaKnown RBP eCLIP14.6□□□□□ -0.07
CD44-224ENST00000526669 SOX5P35711 763 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 NRIP1P48552 1158 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 NDUFV1P49821 464 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 MRE11P49959 708 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 FXR1P51114 621 aaKnown RBP eCLIP14.6□□□□□ -0.07
CD44-224ENST00000526669 CREMQ03060 361 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 ADGRE1Q14246 886 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 RNF19BQ6ZMZ0 732 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 SPATA31D4Q6ZUB0 917 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 PPFIBP1Q86W92 1011 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 DCP1BQ8IZD4 617 aaKnown RBP14.6□□□□□ -0.07
CD44-224ENST00000526669 TTC39CQ8N584 583 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 HEXIM2Q96MH2 286 aaKnown RBP14.6□□□□□ -0.07
CD44-224ENST00000526669 MED10Q9BTT4 135 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 EMILIN2Q9BXX0 1053 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 RHOBTB2Q9BYZ6 727 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 IGFLR1Q9H665 355 aa14.6□□□□□ -0.07
CD44-224ENST00000526669 MTMR11A4FU01 709 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 CLASP2O75122 1294 aaKnown RBP14.59□□□□□ -0.07
CD44-224ENST00000526669 VNN2O95498 520 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 ADH1AP07327 375 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 GNA15P30679 374 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 CLCN1P35523 988 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 STAT1P42224 750 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 ZNF132P52740 706 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 CYP27A1Q02318 531 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 TCEAL5Q5H9L2 206 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 FIGNQ5HY92 759 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 E4F1Q66K89 784 aaPredicted RBP14.59□□□□□ -0.07
CD44-224ENST00000526669 SLC8B1Q6J4K2 584 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 PDE12Q6L8Q7 609 aaKnown RBP14.59□□□□□ -0.07
CD44-224ENST00000526669 LLGL2Q6P1M3 1020 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 FAM71AQ8IYT1 594 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 TTC9BQ8N6N2 239 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 MYLIPQ8WY64 445 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 TNIP3Q96KP6 325 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 GAS2L1Q99501 681 aaPredicted RBP14.59□□□□□ -0.07
CD44-224ENST00000526669 PKMYT1Q99640 499 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 B3GNT5Q9BYG0 378 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 TLE6Q9H808 572 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 ABI2Q9NYB9 513 aaPredicted RBP14.59□□□□□ -0.07
CD44-224ENST00000526669 CAPN11Q9UMQ6 739 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 DAAM1Q9Y4D1 1078 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 IRAK3Q9Y616 596 aa14.59□□□□□ -0.07
CD44-224ENST00000526669 A0A1W2PQJ5 194 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 FAM170AA1A519 330 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 THAP12O43422 761 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 TPM1P09493 284 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 EPCAMP16422 314 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 CDC25BP30305 580 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 ADKP55263 362 aaKnown RBP14.58□□□□□ -0.08
CD44-224ENST00000526669 RBM10P98175 930 aaKnown RBP14.58□□□□□ -0.08
CD44-224ENST00000526669 ADCY1Q08828 1119 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 TBX2Q13207 712 aaPredicted RBP14.58□□□□□ -0.08
CD44-224ENST00000526669 TRIM14Q14142 442 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 ASIC2Q16515 512 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 SGO2Q562F6 1265 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 PPP1R26Q5T8A7 1209 aaPredicted RBP14.58□□□□□ -0.08
CD44-224ENST00000526669 TAF3Q5VWG9 929 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 FAM171BQ6P995 826 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 SLC47A2Q86VL8 602 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 SPATA2LQ8IUW3 424 aaPredicted RBP14.58□□□□□ -0.08
CD44-224ENST00000526669 GPR65Q8IYL9 337 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 CRYBG2Q8N1P7 616 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 ATAD1Q8NBU5 361 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 MYCBPAPQ8TBZ2 947 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 SLC2A14Q8TDB8 520 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 TFAP2BQ92481 460 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 JAKMIP2Q96AA8 810 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 PCED1BQ96HM7 432 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 ZSWIM1Q9BR11 485 aa14.58□□□□□ -0.08
CD44-224ENST00000526669 CRISPLD1Q9H336 500 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms