RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 ST3GAL5Q9UNP4 418 aa6.9□□□□□ -1.3
COPB1-204ENST00000526191 ANKRD6Q9Y2G4 727 aa6.9□□□□□ -1.3
COPB1-204ENST00000526191 ENTPD2Q9Y5L3 495 aa6.9□□□□□ -1.3
COPB1-204ENST00000526191 WRNQ14191 1432 aaPredicted RBP eCLIP6.9□□□□□ -1.31
COPB1-204ENST00000526191 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 CCDC151A5D8V7 595 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 TRIAP1O43715 76 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 GNAI2P04899 355 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 VCAM1P19320 739 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 ITGALP20701 1170 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 ATAT1Q5SQI0 421 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 VPS53Q5VIR6 699 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 PLBD2Q8NHP8 589 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 OSBPL9Q96SU4 736 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 CGRRF1Q99675 332 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 ACTRT3Q9BYD9 372 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 SIK2Q9H0K1 926 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 SLC12A5Q9H2X9 1139 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 KLC4Q9NSK0 619 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 TYW1Q9NV66 732 aaKnown RBP6.89□□□□□ -1.31
COPB1-204ENST00000526191 PCDHA6Q9UN73 950 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 RAD54BQ9Y620 910 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 LMTK3Q96Q04 1460 aa6.89□□□□□ -1.31
COPB1-204ENST00000526191 KIF21BO75037 1637 aa6.88□□□□□ -1.31
COPB1-204ENST00000526191 BIVM-ERCC5R4GMW8 1640 aa6.88□□□□□ -1.31
COPB1-204ENST00000526191 ERICH3Q5RHP9 1530 aa6.88□□□□□ -1.31
COPB1-204ENST00000526191 DNAJB5O75953 348 aa6.88□□□□□ -1.31
COPB1-204ENST00000526191 PDGFRBP09619 1106 aa6.88□□□□□ -1.31
COPB1-204ENST00000526191 CT47B1P0C2W7 299 aaPredicted RBP6.88□□□□□ -1.31
COPB1-204ENST00000526191 GCLCP48506 637 aaPredicted RBP6.88□□□□□ -1.31
COPB1-204ENST00000526191 IFIT1BQ5T764 474 aaKnown RBP6.88□□□□□ -1.31
COPB1-204ENST00000526191 BRIX1Q8TDN6 353 aaKnown RBP6.88□□□□□ -1.31
COPB1-204ENST00000526191 PBKQ96KB5 322 aa6.88□□□□□ -1.31
COPB1-204ENST00000526191 TIMP4Q99727 224 aa6.88□□□□□ -1.31
COPB1-204ENST00000526191 RTFDC1Q9BY42 306 aaPredicted RBP6.88□□□□□ -1.31
COPB1-204ENST00000526191 ARMT1Q9H993 441 aa6.88□□□□□ -1.31
COPB1-204ENST00000526191 RBMXL2O75526 392 aaKnown RBP6.87□□□□□ -1.31
COPB1-204ENST00000526191 OFD1O75665 1012 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 SOAT2O75908 522 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 PDHA1P08559 390 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 NR2F6P10588 404 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 PIM1P11309 404 aaPredicted RBP6.87□□□□□ -1.31
COPB1-204ENST00000526191 CD6P30203 668 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 ZNF134P52741 427 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 SOX8P57073 446 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 PROK1P58294 105 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 NHLH1Q02575 133 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 PIN1Q13526 163 aaPredicted RBP6.87□□□□□ -1.31
COPB1-204ENST00000526191 FAM160B1Q5W0V3 765 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 AMIGO2Q86SJ2 522 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 FAM109AQ8N4B1 249 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 DDX17Q92841 729 aaKnown RBP6.87□□□□□ -1.31
COPB1-204ENST00000526191 RFKQ969G6 155 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 FKBP10Q96AY3 582 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 CDK5RAP3Q96JB5 506 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 SLC46A1Q96NT5 459 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 SERHLQ9NQF3 203 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 DKK3Q9UBP4 350 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 HESX1Q9UBX0 185 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 ADAM21Q9UKJ8 722 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.87□□□□□ -1.31
COPB1-204ENST00000526191 TOP2BQ02880 1626 aa6.87□□□□□ -1.31
COPB1-204ENST00000526191 DCLK1O15075 740 aa6.86□□□□□ -1.31
COPB1-204ENST00000526191 AKAP10O43572 662 aa6.86□□□□□ -1.31
COPB1-204ENST00000526191 URI1O94763 535 aaPredicted RBP6.86□□□□□ -1.31
COPB1-204ENST00000526191 RAB27AP51159 221 aa6.86□□□□□ -1.31
COPB1-204ENST00000526191 IGBP1P78318 339 aa6.86□□□□□ -1.31
COPB1-204ENST00000526191 EIF2B5Q13144 721 aaKnown RBP6.86□□□□□ -1.31
COPB1-204ENST00000526191 TMEM108Q6UXF1 575 aa6.86□□□□□ -1.31
COPB1-204ENST00000526191 SARAFQ96BY9 339 aa6.86□□□□□ -1.31
COPB1-204ENST00000526191 FAM136AQ96C01 138 aa6.86□□□□□ -1.31
COPB1-204ENST00000526191 TTYH3Q9C0H2 523 aa6.86□□□□□ -1.31
COPB1-204ENST00000526191 STXBP5LQ9Y2K9 1186 aa6.86□□□□□ -1.31
COPB1-204ENST00000526191 ABCC2Q92887 1545 aa6.86□□□□□ -1.31
COPB1-204ENST00000526191 AP1G1O43747 822 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 PROP1O75360 226 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 UNC5CO95185 931 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 WT1P19544 449 aaPredicted RBP6.85□□□□□ -1.31
COPB1-204ENST00000526191 GPD1P21695 349 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 ITPKBP27987 946 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 KHDC1LQ5JSQ8 128 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 EMC10Q5UCC4 262 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 RASAL3Q86YV0 1011 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 CAMKK1Q8N5S9 505 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 KLHDC4Q8TBB5 520 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 DIS3LQ8TF46 1054 aaKnown RBP6.85□□□□□ -1.31
COPB1-204ENST00000526191 C1GALT1C1Q96EU7 318 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 LRGUKQ96M69 825 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 STAP2Q9UGK3 403 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 CPA4Q9UI42 421 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 ZNF180Q9UJW8 692 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 FRMD4BQ9Y2L6 1034 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 MAP3K4Q9Y6R4 1608 aa6.85□□□□□ -1.31
COPB1-204ENST00000526191 PTPRGP23470 1445 aa6.84□□□□□ -1.31
COPB1-204ENST00000526191 PPM1DO15297 605 aa6.84□□□□□ -1.31
COPB1-204ENST00000526191 PCSK6P29122 969 aa6.84□□□□□ -1.31
COPB1-204ENST00000526191 KCNJ5P48544 419 aa6.84□□□□□ -1.31
COPB1-204ENST00000526191 TBCCQ15814 346 aa6.84□□□□□ -1.31
COPB1-204ENST00000526191 ZNF788Q6ZQV5 615 aa6.84□□□□□ -1.31
COPB1-204ENST00000526191 TPH2Q8IWU9 490 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms