RNA–Protein interactions for RNA: ENST00000526001.1

CSF1-208, Transcript of colony stimulating factor 1, human

TSL 4

Gene CSF1, Length 573 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSF1-208	ENST00000526001	COL4A2	P08572	1712 aa		13.41	□□□□□ -0.26
CSF1-208	ENST00000526001	TCHH	Q07283	1943 aa		13.41	□□□□□ -0.26
CSF1-208	ENST00000526001	MYBPHL	A2RUH7	354 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	ATP2C2	O75185	946 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	PRAMEF12	O95522	483 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	FGF19	O95750	216 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	CST3	P01034	146 aa	Predicted RBP	13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	CYP2F1	P24903	491 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	LMO2	P25791	158 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	MYL7	Q01449	175 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	MYO1E	Q12965	1108 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	STK4	Q13043	487 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	PSMD6	Q15008	389 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	TAF12	Q16514	161 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	DDR2	Q16832	855 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	KMT5B	Q4FZB7	885 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	ARHGAP15	Q53QZ3	475 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	TRAPPC11	Q7Z392	1133 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	LIMS2	Q7Z4I7	341 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	ZNF687	Q8N1G0	1237 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	XXYLT1	Q8NBI6	393 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	KBTBD7	Q8WVZ9	684 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	CLDN23	Q96B33	292 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	ZFYVE19	Q96K21	471 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	CGRRF1	Q99675	332 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	SLC46A2	Q9BY10	475 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	TASP1	Q9H6P5	420 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	TRPV5	Q9NQA5	729 aa		13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	NDRG2	Q9UN36	371 aa	Known RBP	13.4	□□□□□ -0.26
CSF1-208	ENST00000526001	F11	P03951	625 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	TNNI1	P19237	187 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	CMA1	P23946	247 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	CDC25C	P30307	473 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	SOX9	P48436	509 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	LHX1	P48742	406 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	CASP4	P49662	377 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	NLRP12	P59046	1061 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	PSMC1	P62191	440 aa	Known RBP	13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	SNRPF	P62306	86 aa	Known RBP	13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	FCHO2	Q0JRZ9	810 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	NFE2	Q16621	373 aa	Predicted RBP	13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	KNOP1	Q1ED39	458 aa	Known RBP	13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	HS2ST1	Q7LGA3	356 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	C12orf56	Q8IXR9	622 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	YAF2	Q8IY57	180 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	KIAA0895	Q8NCT3	520 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	TTC8	Q8TAM2	541 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	SPATA18	Q8TC71	538 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	PLEKHO2	Q8TD55	490 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	FAM3C	Q92520	227 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	ZNF516	Q92618	1163 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	E2F7	Q96AV8	911 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	SPATA32	Q96LK8	384 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	GCNA	Q96QF7	691 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	FNBP1	Q96RU3	617 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	NELL2	Q99435	816 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	HPSE	Q9Y251	543 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	MRPS17	Q9Y2R5	130 aa	Known RBP	13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	NME7	Q9Y5B8	376 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	PIAS3	Q9Y6X2	628 aa		13.39	□□□□□ -0.27
CSF1-208	ENST00000526001	SLC38A8	A6NNN8	435 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	MAN2B1	O00754	1011 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	DPYSL4	O14531	572 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	CHAD	O15335	359 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	PDGFRB	P09619	1106 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	WARS	P23381	471 aa	Known RBP	13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	CCNE1	P24864	410 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	PCSK1	P29120	753 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	KRT85	P78386	507 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	FAM171B	Q6P995	826 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	DPH6	Q7L8W6	267 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	MMS19	Q96T76	1030 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	SYT15	Q9BQS2	421 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	MRPL45	Q9BRJ2	306 aa	Known RBP	13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	ABCB6	Q9NP58	842 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	CRTAC1	Q9NQ79	661 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	EXOC1	Q9NV70	894 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	CACNA1H	O95180	2353 aa		13.38	□□□□□ -0.27
CSF1-208	ENST00000526001	MIA3	Q5JRA6	1907 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	TICRR	Q7Z2Z1	1910 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	NCAM2	O15394	837 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	LAMTOR5	O43504	91 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	EXOC3	O60645	756 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	TADA3	O75528	432 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	NOL4	O94818	638 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	PRR29	P0C7W0	189 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	CSH1	P0DML2	217 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	CSH2	P0DML3	217 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	WEE1	P30291	646 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	MAGEA9	P43362	315 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	RPS9	P46781	194 aa	Known RBP	13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	NDUFA8	P51970	172 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	MYL6	P60660	151 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	CSTF1	Q05048	431 aa	Known RBP	13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	TNK2	Q07912	1038 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	CFAP221	Q4G0U5	840 aa		13.37	□□□□□ -0.27
CSF1-208	ENST00000526001	WDR44	Q5JSH3	913 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms