RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 STXBP4Q6ZWJ1 553 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 ADGRF2Q8IZF7 708 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 RIN3Q8TB24 985 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 PLEKHO2Q8TD55 490 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 KBTBD7Q8WVZ9 684 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 ANKRD36BP1Q96IX9 119 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 SLC46A2Q9BY10 475 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 LRRC27Q9C0I9 530 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 GDAP2Q9NXN4 497 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 FAM13BQ9NYF5 915 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 HSFX1Q9UBD0 423 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 MAGED2Q9UNF1 606 aaPredicted RBP12.95□□□□□ -0.34
SSBP3-210ENST00000525990 PCDHB5Q9Y5E4 795 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 PIAS3Q9Y6X2 628 aa12.95□□□□□ -0.34
SSBP3-210ENST00000525990 F5P12259 2224 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 GABRDO14764 452 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 CST3P01034 146 aaPredicted RBP12.94□□□□□ -0.34
SSBP3-210ENST00000525990 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 DLATP10515 647 aaKnown RBP12.94□□□□□ -0.34
SSBP3-210ENST00000525990 PFKFB1P16118 471 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 CCNE1P24864 410 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 RBP5P82980 135 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 TSPY1Q01534 308 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 TNK2Q07912 1038 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 CYP24A1Q07973 514 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 VEPH1Q14D04 833 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 TXNDC11Q6PKC3 985 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 TRAPPC11Q7Z392 1133 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 ITIH5Q86UX2 942 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 WDR49Q8IV35 697 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 DCP1BQ8IZD4 617 aaKnown RBP12.94□□□□□ -0.34
SSBP3-210ENST00000525990 ADSSL1Q8N142 457 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 KIAA0895Q8NCT3 520 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 DEPDC1BQ8WUY9 529 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 LEO1Q8WVC0 666 aaPredicted RBP12.94□□□□□ -0.34
SSBP3-210ENST00000525990 IRF7Q92985 503 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 CLDN23Q96B33 292 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 CCDC127Q96BQ5 260 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 PAGE5Q96GU1 130 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 HPDLQ96IR7 371 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 CGRRF1Q99675 332 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 BCO2Q9BYV7 579 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 OSBPL6Q9BZF3 934 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 MAGEF1Q9HAY2 307 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 CRTAC1Q9NQ79 661 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 GTSE1Q9NYZ3 720 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 CCL26Q9Y258 94 aa12.94□□□□□ -0.34
SSBP3-210ENST00000525990 UBE4BO95155 1302 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 EML5Q05BV3 1969 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 KIAA0391O15091 583 aaKnown RBP12.93□□□□□ -0.34
SSBP3-210ENST00000525990 TNNC2P02585 160 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 F11P03951 625 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 HOXC13P31276 330 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 NLRP12P59046 1061 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 CSTF1Q05048 431 aaKnown RBP12.93□□□□□ -0.34
SSBP3-210ENST00000525990 FCHO2Q0JRZ9 810 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 STK4Q13043 487 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 MTAPQ13126 283 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 BMT2Q1RMZ1 405 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 TXNDC8Q6A555 127 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 LIMS2Q7Z4I7 341 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 TMEM86AQ8N2M4 240 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 TOP6BLQ8N6T0 577 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 MAB21L3Q8N8X9 362 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 C2orf15Q8WU43 125 aaKnown RBP12.93□□□□□ -0.34
SSBP3-210ENST00000525990 FAM3CQ92520 227 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 ACBD6Q9BR61 282 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 MRPL45Q9BRJ2 306 aaKnown RBP12.93□□□□□ -0.34
SSBP3-210ENST00000525990 GPR88Q9GZN0 384 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 TASP1Q9H6P5 420 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 RBM12Q9NTZ6 932 aaKnown RBP12.93□□□□□ -0.34
SSBP3-210ENST00000525990 CFAP45Q9UL16 551 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 CFAP54Q96N23 3096 aa12.93□□□□□ -0.34
SSBP3-210ENST00000525990 CHADO15335 359 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 LAMTOR5O43504 91 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 PDGFRBP09619 1106 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 SLFN14P0C7P3 912 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 TNNI1P19237 187 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 CDC25CP30307 473 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 MYL7Q01449 175 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 MYO1EQ12965 1108 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 GAS6Q14393 721 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 PSMD6Q15008 389 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 TAF12Q16514 161 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 KNOP1Q1ED39 458 aaKnown RBP12.92□□□□□ -0.34
SSBP3-210ENST00000525990 DUOXA2Q1HG44 320 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 KMT5BQ4FZB7 885 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 ARHGAP15Q53QZ3 475 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 ATL3Q6DD88 541 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 SCN4BQ8IWT1 228 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 YAF2Q8IY57 180 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 CEP57L1Q8IYX8 460 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 CMTM8Q8IZV2 173 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 XXYLT1Q8NBI6 393 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 MYLPFQ96A32 169 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 SLC22A12Q96S37 553 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 SYT15Q9BQS2 421 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 TRPV5Q9NQA5 729 aa12.92□□□□□ -0.34
SSBP3-210ENST00000525990 TMEM30AQ9NV96 361 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms