RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 MAVSQ7Z434 540 aa5.36□□□□□ -1.55
CSDE1-210ENST00000525878 ZNF804AQ7Z570 1209 aa5.36□□□□□ -1.55
CSDE1-210ENST00000525878 DDX17Q92841 729 aaKnown RBP5.36□□□□□ -1.55
CSDE1-210ENST00000525878 MRPL46Q9H2W6 279 aaKnown RBP5.36□□□□□ -1.55
CSDE1-210ENST00000525878 WDCPQ9H6R7 721 aa5.36□□□□□ -1.55
CSDE1-210ENST00000525878 USP35Q9P2H5 1018 aa5.36□□□□□ -1.55
CSDE1-210ENST00000525878 SH2B3Q9UQQ2 575 aa5.36□□□□□ -1.55
CSDE1-210ENST00000525878 ZNF521Q96K83 1311 aa5.36□□□□□ -1.55
CSDE1-210ENST00000525878 IKBKBO14920 756 aa5.35□□□□□ -1.55
CSDE1-210ENST00000525878 SLC16A6O15403 523 aa5.35□□□□□ -1.55
CSDE1-210ENST00000525878 BMP15O95972 392 aa5.35□□□□□ -1.55
CSDE1-210ENST00000525878 TOP3BO95985 862 aaKnown RBP5.35□□□□□ -1.55
CSDE1-210ENST00000525878 IL6RP08887 468 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-210ENST00000525878 LIPAP38571 399 aa5.35□□□□□ -1.55
CSDE1-210ENST00000525878 HK3P52790 923 aa5.35□□□□□ -1.55
CSDE1-210ENST00000525878 EEFSECP57772 596 aaKnown RBP5.35□□□□□ -1.55
CSDE1-210ENST00000525878 NOGQ13253 232 aa5.35□□□□□ -1.55
CSDE1-210ENST00000525878 ICE2Q659A1 982 aa5.35□□□□□ -1.55
CSDE1-210ENST00000525878 SLC9A4Q6AI14 798 aa5.35□□□□□ -1.55
CSDE1-210ENST00000525878 SFRP4Q6FHJ7 346 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-210ENST00000525878 FANCBQ8NB91 859 aa5.35□□□□□ -1.55
CSDE1-210ENST00000525878 SLAMF7Q9NQ25 335 aa5.35□□□□□ -1.55
CSDE1-210ENST00000525878 PCDHA3Q9Y5H8 950 aa5.35□□□□□ -1.55
CSDE1-210ENST00000525878 SLC16A3O15427 465 aaKnown RBP5.34□□□□□ -1.55
CSDE1-210ENST00000525878 TLR5O60602 858 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 ONECUT2O95948 504 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 CYP2D6P10635 497 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 GUCY2FP51841 1108 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 ZNF134P52741 427 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 FAM160B1Q5W0V3 765 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 TMEM108Q6UXF1 575 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 PRR18Q8N4B5 295 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.34□□□□□ -1.55
CSDE1-210ENST00000525878 DENND1AQ8TEH3 1009 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 SH2D3AQ9BRG2 576 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 SPC25Q9HBM1 224 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 DUSP22Q9NRW4 184 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 HESX1Q9UBX0 185 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 TBC1D30Q9Y2I9 924 aa5.34□□□□□ -1.55
CSDE1-210ENST00000525878 TNKSO95271 1327 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 PPEF2O14830 753 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 DCLK1O15075 740 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 CYP2C18P33260 490 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 SP2Q02086 613 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 ITKQ08881 620 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 THEMIS2Q5TEJ8 643 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 CATSPERGQ6ZRH7 1159 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 HEATR3Q7Z4Q2 680 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 PPP1R3BQ86XI6 285 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 GALNT16Q8N428 558 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 FSD1LQ9BXM9 530 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 PRSS22Q9GZN4 317 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-210ENST00000525878 ABCF2Q9UG63 623 aa5.33□□□□□ -1.56
CSDE1-210ENST00000525878 SMIM22K7EJ46 135 aa5.32□□□□□ -1.56
CSDE1-210ENST00000525878 M0QYG6 137 aa5.32□□□□□ -1.56
CSDE1-210ENST00000525878 QSOX1O00391 747 aa5.32□□□□□ -1.56
CSDE1-210ENST00000525878 TRIM38O00635 465 aa5.32□□□□□ -1.56
CSDE1-210ENST00000525878 GNAI2P04899 355 aa5.32□□□□□ -1.56
CSDE1-210ENST00000525878 PIM1P11309 404 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-210ENST00000525878 CDK11BP21127 795 aaKnown RBP5.32□□□□□ -1.56
CSDE1-210ENST00000525878 CDKN1CP49918 316 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-210ENST00000525878 CYP4F2P78329 520 aa5.32□□□□□ -1.56
CSDE1-210ENST00000525878 TREML2Q5T2D2 321 aa5.32□□□□□ -1.56
CSDE1-210ENST00000525878 PNMA8AQ86V59 439 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-210ENST00000525878 TNPO1Q92973 898 aaKnown RBP5.32□□□□□ -1.56
CSDE1-210ENST00000525878 SSX2IPQ9Y2D8 614 aa5.32□□□□□ -1.56
CSDE1-210ENST00000525878 FNDC1Q4ZHG4 1894 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-210ENST00000525878 CYP2D7A0A087X1C5 515 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 KATNA1O75449 491 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 DNAJB5O75953 348 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 TJP3O95049 919 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 NTN1O95631 604 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 TYRP14679 529 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 PDCP20941 246 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 PPIFP30405 207 aaKnown RBP5.31□□□□□ -1.56
CSDE1-210ENST00000525878 CLCN2P51788 898 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 HOXA4Q00056 320 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-210ENST00000525878 DAZAP2Q15038 168 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-210ENST00000525878 PCID2Q5JVF3 399 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 EMC10Q5UCC4 262 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 SLC2A7Q6PXP3 512 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 CHSY1Q86X52 802 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 MIER2Q8N344 545 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 C8orf58Q8NAV2 365 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 FAM46DQ8NEK8 389 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 RGMAQ96B86 450 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 MTMR8Q96EF0 704 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 SLC46A1Q96NT5 459 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 TMEM79Q9BSE2 394 aa5.31□□□□□ -1.56
CSDE1-210ENST00000525878 FEZ2Q9UHY8 353 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-210ENST00000525878 SMIM35A0A1B0GVV1 85 aa5.3□□□□□ -1.56
CSDE1-210ENST00000525878 ERC2O15083 957 aa5.3□□□□□ -1.56
CSDE1-210ENST00000525878 AHSGP02765 367 aa5.3□□□□□ -1.56
CSDE1-210ENST00000525878 HOXB6P17509 224 aaKnown RBP5.3□□□□□ -1.56
CSDE1-210ENST00000525878 FOXG1P55316 489 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-210ENST00000525878 LOXL3P58215 753 aa5.3□□□□□ -1.56
CSDE1-210ENST00000525878 PTPN21Q16825 1174 aa5.3□□□□□ -1.56
CSDE1-210ENST00000525878 KRT73Q86Y46 540 aa5.3□□□□□ -1.56
CSDE1-210ENST00000525878 CPA6Q8N4T0 437 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms