RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 C1QTNF7Q9BXJ2 289 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 ACTRT3Q9BYD9 372 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 GTPBP4Q9BZE4 634 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 BRD9Q9H8M2 597 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 ZNF70Q9UC06 446 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 AOX1Q06278 1338 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 EFCAB5A4FU69 1503 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 BIVM-ERCC5R4GMW8 1640 aa3.32□□□□□ -1.88
ECHDC1-218ENST00000525745 ARID4BQ4LE39 1312 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 LINC01548A6NM66 108 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 SLC16A6O15403 523 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 ARIH2O95376 493 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 HNRNPCP07910 306 aaKnown RBP eCLIP3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 ZFXP17010 805 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 ITGALP20701 1170 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 DRD4P21917 467 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 PHKA1P46020 1223 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 ZNF135P52742 658 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 SLC10A2Q12908 348 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 EIF2B5Q13144 721 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 SNAPC2Q13487 334 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 LLGL1Q15334 1064 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 MINDY4Q4G0A6 757 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 PLAC9Q5JTB6 97 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 ATAT1Q5SQI0 421 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 SUMO4Q6EEV6 95 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 TAF2Q6P1X5 1199 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 C1QL2Q7Z5L3 287 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 PDSS2Q86YH6 399 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 FMNL3Q8IVF7 1028 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 MYO1HQ8N1T3 1032 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 VGLL2Q8N8G2 317 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 PSD4Q8NDX1 1056 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 NSUN6Q8TEA1 469 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 HPS3Q969F9 1004 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 RFKQ969G6 155 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 C1GALT1C1Q96EU7 318 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 MVB12AQ96EY5 273 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 AIFM3Q96NN9 605 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 CNPPD1Q9BV87 410 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 ALG8Q9BVK2 526 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 GNL3LQ9NVN8 582 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 MRPS18AQ9NVS2 196 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 CFAP97Q9P2B7 532 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 PCDHA3Q9Y5H8 950 aa3.31□□□□□ -1.88
ECHDC1-218ENST00000525745 THOC2Q8NI27 1593 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 PRXQ9BXM0 1461 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 CCNB3Q8WWL7 1395 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 SPATA31A3Q5VYP0 1347 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 GOLGA6CA6NDK9 693 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 GOLGA6BA6NDN3 693 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 LRRC14BA6NHZ5 514 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 H3BUI4 141 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 TSPAN6O43657 245 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 CTNND1O60716 968 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 EIF5BO60841 1220 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 KIF20AO95235 890 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 SCGB1D2O95969 90 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 FTLP02792 175 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 GOLGA6DP0CG33 693 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 NDUFB7P17568 137 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 ITGB6P18564 788 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 LPOP22079 712 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 CD6P30203 668 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 FXR1P51114 621 aaKnown RBP eCLIP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 TFF2Q03403 129 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 ZNF267Q14586 743 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 MLC1Q15049 377 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 TBCCQ15814 346 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 MTX3Q5HYI7 312 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 RBM20Q5T481 1227 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 FAM102BQ5T8I3 360 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 CXorf57Q6NSI4 855 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 ZNF782Q6ZMW2 699 aaPredicted RBP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 BHLHA9Q7RTU4 235 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 WDR75Q8IWA0 830 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 SEMA6DQ8NFY4 1073 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 SLC35G2Q8TBE7 412 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 TSR2Q969E8 191 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 OSBPL9Q96SU4 736 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 AMBRA1Q9C0C7 1298 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 NMRK2Q9NPI5 230 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 SIDT1Q9NXL6 827 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 ETAA1Q9NY74 926 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 GOLGA6AQ9NYA3 693 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 EHD3Q9NZN3 535 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 FLRT1Q9NZU1 646 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 DKK3Q9UBP4 350 aa3.3□□□□□ -1.88
ECHDC1-218ENST00000525745 KRTAP29-1A8MX34 341 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 TARM1B6A8C7 271 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 NT5C1B-RDH14C9J2C7 533 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 CHEK2O96017 543 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 PDHA1P08559 390 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 PRR35P0CG20 571 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 PIK3CGP48736 1102 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 MAP2K6P52564 334 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 HK3P52790 923 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 BMPR2Q13873 1038 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 HABP2Q14520 560 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms