RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 SMC3Q9UQE7 1217 aa25.82■■□□□ 1.72
USP47-205ENST00000525257 GREB1Q4ZG55 1949 aa25.82■■□□□ 1.72
USP47-205ENST00000525257 SPAG17Q6Q759 2223 aa25.82■■□□□ 1.72
USP47-205ENST00000525257 ATG2BQ96BY7 2078 aa25.81■■□□□ 1.72
USP47-205ENST00000525257 FOXD2O60548 495 aaPredicted RBP25.81■■□□□ 1.72
USP47-205ENST00000525257 BMP15O95972 392 aa25.81■■□□□ 1.72
USP47-205ENST00000525257 TSPY1Q01534 308 aa25.81■■□□□ 1.72
USP47-205ENST00000525257 SF3A2Q15428 464 aaKnown RBP25.81■■□□□ 1.72
USP47-205ENST00000525257 AASDHQ4L235 1098 aaPredicted RBP25.81■■□□□ 1.72
USP47-205ENST00000525257 SDHAF4Q5VUM1 108 aa25.81■■□□□ 1.72
USP47-205ENST00000525257 TXNDC8Q6A555 127 aa25.81■■□□□ 1.72
USP47-205ENST00000525257 DYMQ7RTS9 669 aa25.81■■□□□ 1.72
USP47-205ENST00000525257 RIN3Q8TB24 985 aa25.81■■□□□ 1.72
USP47-205ENST00000525257 GAB3Q8WWW8 586 aa25.81■■□□□ 1.72
USP47-205ENST00000525257 ZNF560Q96MR9 790 aa25.81■■□□□ 1.72
USP47-205ENST00000525257 TDP1Q9NUW8 608 aa25.81■■□□□ 1.72
USP47-205ENST00000525257 PRPF40AO75400 957 aaKnown RBP25.8■■□□□ 1.72
USP47-205ENST00000525257 RPP40O75818 363 aaKnown RBP25.8■■□□□ 1.72
USP47-205ENST00000525257 IL18RAPO95256 599 aa25.8■■□□□ 1.72
USP47-205ENST00000525257 ARSAP15289 507 aa25.8■■□□□ 1.72
USP47-205ENST00000525257 DDX6P26196 483 aaKnown RBP eCLIP25.8■■□□□ 1.72
USP47-205ENST00000525257 ADSSP30520 456 aa25.8■■□□□ 1.72
USP47-205ENST00000525257 DDIT3P35638 169 aa25.8■■□□□ 1.72
USP47-205ENST00000525257 SF3A1Q15459 793 aaKnown RBP25.8■■□□□ 1.72
USP47-205ENST00000525257 LARP1BQ659C4 914 aaKnown RBP25.8■■□□□ 1.72
USP47-205ENST00000525257 ZNF720Q7Z2F6 126 aa25.8■■□□□ 1.72
USP47-205ENST00000525257 MRPS31Q92665 395 aaKnown RBP25.8■■□□□ 1.72
USP47-205ENST00000525257 KIF9Q9HAQ2 790 aa25.8■■□□□ 1.72
USP47-205ENST00000525257 SLC8A2Q9UPR5 921 aa25.8■■□□□ 1.72
USP47-205ENST00000525257 TRDMT1O14717 391 aaKnown RBP25.79■■□□□ 1.72
USP47-205ENST00000525257 EGFP01133 1207 aa25.79■■□□□ 1.72
USP47-205ENST00000525257 CCDC192P0DO97 292 aa25.79■■□□□ 1.72
USP47-205ENST00000525257 POLR2BP30876 1174 aaKnown RBP25.79■■□□□ 1.72
USP47-205ENST00000525257 WNT7BP56706 349 aa25.79■■□□□ 1.72
USP47-205ENST00000525257 TFAMQ00059 246 aaKnown RBP25.79■■□□□ 1.72
USP47-205ENST00000525257 POU5F1Q01860 360 aaKnown RBP25.79■■□□□ 1.72
USP47-205ENST00000525257 CC2D1AQ6P1N0 951 aaPredicted RBP25.79■■□□□ 1.72
USP47-205ENST00000525257 CACNA2D4Q7Z3S7 1137 aa25.79■■□□□ 1.72
USP47-205ENST00000525257 KBTBD6Q86V97 674 aa25.79■■□□□ 1.72
USP47-205ENST00000525257 HVCN1Q96D96 273 aa25.79■■□□□ 1.72
USP47-205ENST00000525257 FAM213AQ9BRX8 229 aa25.79■■□□□ 1.72
USP47-205ENST00000525257 POLR3BQ9NW08 1133 aaPredicted RBP25.79■■□□□ 1.72
USP47-205ENST00000525257 CNOT1A5YKK6 2376 aaKnown RBP25.78■■□□□ 1.72
USP47-205ENST00000525257 ATG13O75143 517 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 RNF40O75150 1001 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 CSH1P0DML2 217 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 CSH2P0DML3 217 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 PNPLA4P41247 253 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 KCNA1Q09470 495 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 POSTNQ15063 836 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 NFE2Q16621 373 aaPredicted RBP25.78■■□□□ 1.72
USP47-205ENST00000525257 DDR2Q16832 855 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 IL31Q6EBC2 164 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 USP49Q70CQ1 688 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 BRAPQ7Z569 592 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 MON1AQ86VX9 555 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 NT5DC4Q86YG4 428 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 PDCL2Q8N4E4 241 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 C12orf50Q8NA57 414 aaPredicted RBP25.78■■□□□ 1.72
USP47-205ENST00000525257 ZSWIM2Q8NEG5 633 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 SAAL1Q96ER3 474 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 EPSTI1Q96J88 318 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 FBRSL1Q9HCM7 1045 aaKnown RBP25.78■■□□□ 1.72
USP47-205ENST00000525257 L1RE1Q9UN81 338 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 AGAP1Q9UPQ3 857 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 EML5Q05BV3 1969 aa25.78■■□□□ 1.72
USP47-205ENST00000525257 PPP1R37O75864 691 aa25.77■■□□□ 1.72
USP47-205ENST00000525257 EPN2O95208 641 aa25.77■■□□□ 1.72
USP47-205ENST00000525257 ITGB3P05106 788 aa25.77■■□□□ 1.72
USP47-205ENST00000525257 ACAT1P24752 427 aaKnown RBP25.77■■□□□ 1.72
USP47-205ENST00000525257 NAIF1Q69YI7 327 aaPredicted RBP25.77■■□□□ 1.72
USP47-205ENST00000525257 TTC16Q8NEE8 873 aa25.77■■□□□ 1.72
USP47-205ENST00000525257 LOXL4Q96JB6 756 aa25.77■■□□□ 1.72
USP47-205ENST00000525257 MRPL44Q9H9J2 332 aaKnown RBP25.77■■□□□ 1.72
USP47-205ENST00000525257 TBC1D7Q9P0N9 293 aa25.77■■□□□ 1.72
USP47-205ENST00000525257 CCDC163A0A0D9SF12 145 aa25.76■■□□□ 1.71
USP47-205ENST00000525257 TADA3O75528 432 aa25.76■■□□□ 1.71
USP47-205ENST00000525257 CYP2F1P24903 491 aa25.76■■□□□ 1.71
USP47-205ENST00000525257 RAP1GAPP47736 663 aa25.76■■□□□ 1.71
USP47-205ENST00000525257 C1orf127Q8N9H9 656 aa25.76■■□□□ 1.71
USP47-205ENST00000525257 DDX1Q92499 740 aaKnown RBP25.76■■□□□ 1.71
USP47-205ENST00000525257 FAM84AQ96KN4 292 aa25.76■■□□□ 1.71
USP47-205ENST00000525257 HHIPQ96QV1 700 aa25.76■■□□□ 1.71
USP47-205ENST00000525257 TRPC7Q9HCX4 862 aa25.76■■□□□ 1.71
USP47-205ENST00000525257 RXFP3Q9NSD7 469 aa25.76■■□□□ 1.71
USP47-205ENST00000525257 DDX43Q9NXZ2 648 aaKnown RBP25.76■■□□□ 1.71
USP47-205ENST00000525257 HUS1O60921 280 aa25.75■■□□□ 1.71
USP47-205ENST00000525257 ZNF806P0C7X5 589 aa25.75■■□□□ 1.71
USP47-205ENST00000525257 GALK1P51570 392 aa25.75■■□□□ 1.71
USP47-205ENST00000525257 RPL10AP62906 217 aaKnown RBP25.75■■□□□ 1.71
USP47-205ENST00000525257 AMPD2Q01433 879 aa25.75■■□□□ 1.71
USP47-205ENST00000525257 ZNF268Q14587 947 aaPredicted RBP25.75■■□□□ 1.71
USP47-205ENST00000525257 PDGFRLQ15198 375 aa25.75■■□□□ 1.71
USP47-205ENST00000525257 ST3GAL2Q16842 350 aa25.75■■□□□ 1.71
USP47-205ENST00000525257 CCDC142Q17RM4 750 aa25.75■■□□□ 1.71
USP47-205ENST00000525257 SCARA3Q6AZY7 606 aa25.75■■□□□ 1.71
USP47-205ENST00000525257 BRSK2Q8IWQ3 736 aa25.75■■□□□ 1.71
USP47-205ENST00000525257 LEO1Q8WVC0 666 aaPredicted RBP25.75■■□□□ 1.71
USP47-205ENST00000525257 P2RY13Q9BPV8 354 aa25.75■■□□□ 1.71
USP47-205ENST00000525257 ACBD6Q9BR61 282 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms