RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 BRSK2Q8IWQ3 736 aa18.46■□□□□ 0.55
TSKU-202ENST00000525167 TMEM86AQ8N2M4 240 aa18.46■□□□□ 0.55
TSKU-202ENST00000525167 LRRC52Q8N7C0 313 aa18.46■□□□□ 0.55
TSKU-202ENST00000525167 MRPS31Q92665 395 aaKnown RBP18.46■□□□□ 0.55
TSKU-202ENST00000525167 USP13Q92995 863 aaPredicted RBP18.46■□□□□ 0.55
TSKU-202ENST00000525167 CNTNAP3BQ96NU0 1288 aa18.46■□□□□ 0.55
TSKU-202ENST00000525167 ACBD6Q9BR61 282 aa18.46■□□□□ 0.55
TSKU-202ENST00000525167 CNTNAP3Q9BZ76 1288 aa18.46■□□□□ 0.55
TSKU-202ENST00000525167 SMG9Q9H0W8 520 aaKnown RBP18.46■□□□□ 0.55
TSKU-202ENST00000525167 C2orf42Q9NWW7 574 aa18.46■□□□□ 0.55
TSKU-202ENST00000525167 UXTQ9UBK9 157 aaPredicted RBP18.46■□□□□ 0.55
TSKU-202ENST00000525167 TCHHQ07283 1943 aa18.45■□□□□ 0.54
TSKU-202ENST00000525167 AKAP3O75969 853 aa18.45■□□□□ 0.54
TSKU-202ENST00000525167 RPL10AP62906 217 aaKnown RBP18.45■□□□□ 0.54
TSKU-202ENST00000525167 ALCAMQ13740 583 aa18.45■□□□□ 0.54
TSKU-202ENST00000525167 PDGFRLQ15198 375 aa18.45■□□□□ 0.54
TSKU-202ENST00000525167 L1TD1Q5T7N2 865 aaKnown RBP18.45■□□□□ 0.54
TSKU-202ENST00000525167 CC2D1AQ6P1N0 951 aaPredicted RBP18.45■□□□□ 0.54
TSKU-202ENST00000525167 DYMQ7RTS9 669 aa18.45■□□□□ 0.54
TSKU-202ENST00000525167 PDCL2Q8N4E4 241 aa18.45■□□□□ 0.54
TSKU-202ENST00000525167 MAB21L3Q8N8X9 362 aa18.45■□□□□ 0.54
TSKU-202ENST00000525167 CACTINQ8WUQ7 758 aaKnown RBP18.45■□□□□ 0.54
TSKU-202ENST00000525167 GAB3Q8WWW8 586 aa18.45■□□□□ 0.54
TSKU-202ENST00000525167 TRMT2BQ96GJ1 504 aaKnown RBP18.45■□□□□ 0.54
TSKU-202ENST00000525167 ACCSQ96QU6 501 aa18.45■□□□□ 0.54
TSKU-202ENST00000525167 MRPL44Q9H9J2 332 aaKnown RBP18.45■□□□□ 0.54
TSKU-202ENST00000525167 HPS4Q9NQG7 708 aa18.45■□□□□ 0.54
TSKU-202ENST00000525167 OLFML3Q9NRN5 406 aa18.45■□□□□ 0.54
TSKU-202ENST00000525167 EXTL3O43909 919 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 HUS1O60921 280 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 PRPF40AO75400 957 aaKnown RBP18.44■□□□□ 0.54
TSKU-202ENST00000525167 GARTP22102 1010 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 TXLNAP40222 546 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 LIMK1P53667 647 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 TFAMQ00059 246 aaKnown RBP18.44■□□□□ 0.54
TSKU-202ENST00000525167 MYL7Q01449 175 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 FBXO43Q4G163 708 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 FSTL4Q6MZW2 842 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 CACNA2D4Q7Z3S7 1137 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 CAMKK1Q8N5S9 505 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 EPSTI1Q96J88 318 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 MYRFLQ96LU7 910 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 FAM213AQ9BRX8 229 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 TMEM206Q9H813 350 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 TMLHEQ9NVH6 421 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 GDAP2Q9NXN4 497 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 ITGA11Q9UKX5 1188 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 CCL26Q9Y258 94 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 PCDHB13Q9Y5F0 798 aa18.44■□□□□ 0.54
TSKU-202ENST00000525167 DENND4CQ5VZ89 1909 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 RPP40O75818 363 aaKnown RBP18.43■□□□□ 0.54
TSKU-202ENST00000525167 NOL4O94818 638 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 ITGB3P05106 788 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 PDCP20941 246 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 DRD1P21728 446 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 POLR2BP30876 1174 aaKnown RBP18.43■□□□□ 0.54
TSKU-202ENST00000525167 CFAP221Q4G0U5 840 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 PPM1JQ5JR12 505 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 INTS6LQ5JSJ4 861 aaKnown RBP18.43■□□□□ 0.54
TSKU-202ENST00000525167 TXNDC8Q6A555 127 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 SV2BQ7L1I2 683 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 C1orf127Q8N9H9 656 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 DNAJC19Q96DA6 116 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 FUBP3Q96I24 572 aaKnown RBP eCLIP18.43■□□□□ 0.54
TSKU-202ENST00000525167 PI4K2AQ9BTU6 479 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 IKZF4Q9H2S9 585 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 EBF3Q9H4W6 596 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 DDX43Q9NXZ2 648 aaKnown RBP18.43■□□□□ 0.54
TSKU-202ENST00000525167 RBAKQ9NYW8 714 aaPredicted RBP18.43■□□□□ 0.54
TSKU-202ENST00000525167 L1RE1Q9UN81 338 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 AGAP1Q9UPQ3 857 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 SLC8A2Q9UPR5 921 aa18.43■□□□□ 0.54
TSKU-202ENST00000525167 SRPRBQ9Y5M8 271 aaKnown RBP18.43■□□□□ 0.54
TSKU-202ENST00000525167 MYMKA6NI61 221 aa18.42■□□□□ 0.54
TSKU-202ENST00000525167 EPN2O95208 641 aa18.42■□□□□ 0.54
TSKU-202ENST00000525167 RAP1GAPP47736 663 aa18.42■□□□□ 0.54
TSKU-202ENST00000525167 LHX1P48742 406 aa18.42■□□□□ 0.54
TSKU-202ENST00000525167 RRAGBQ5VZM2 374 aa18.42■□□□□ 0.54
TSKU-202ENST00000525167 USP49Q70CQ1 688 aa18.42■□□□□ 0.54
TSKU-202ENST00000525167 CPA6Q8N4T0 437 aa18.42■□□□□ 0.54
TSKU-202ENST00000525167 TOP6BLQ8N6T0 577 aa18.42■□□□□ 0.54
TSKU-202ENST00000525167 CHFRQ96EP1 664 aa18.42■□□□□ 0.54
TSKU-202ENST00000525167 PKMYT1Q99640 499 aa18.42■□□□□ 0.54
TSKU-202ENST00000525167 FBXO2Q9UK22 296 aaPredicted RBP18.42■□□□□ 0.54
TSKU-202ENST00000525167 MAGED2Q9UNF1 606 aaPredicted RBP18.42■□□□□ 0.54
TSKU-202ENST00000525167 PCDHGA5Q9Y5G8 931 aa18.42■□□□□ 0.54
TSKU-202ENST00000525167 MORC2Q9Y6X9 1032 aaPredicted RBP18.42■□□□□ 0.54
TSKU-202ENST00000525167 EPG5Q9HCE0 2579 aa18.41■□□□□ 0.54
TSKU-202ENST00000525167 OBSL1O75147 1896 aa18.41■□□□□ 0.54
TSKU-202ENST00000525167 FRMD3A2A2Y4 597 aa18.41■□□□□ 0.54
TSKU-202ENST00000525167 OTOL1A6NHN0 477 aaPredicted RBP18.41■□□□□ 0.54
TSKU-202ENST00000525167 KIAA0391O15091 583 aaKnown RBP18.41■□□□□ 0.54
TSKU-202ENST00000525167 GCNT3O95395 438 aa18.41■□□□□ 0.54
TSKU-202ENST00000525167 ZNF806P0C7X5 589 aa18.41■□□□□ 0.54
TSKU-202ENST00000525167 PCSK1P29120 753 aa18.41■□□□□ 0.54
TSKU-202ENST00000525167 CDR1P51861 262 aa18.41■□□□□ 0.54
TSKU-202ENST00000525167 RBP5P82980 135 aa18.41■□□□□ 0.54
TSKU-202ENST00000525167 FAM160A1Q05DH4 1040 aa18.41■□□□□ 0.54
TSKU-202ENST00000525167 KCNA1Q09470 495 aa18.41■□□□□ 0.54
TSKU-202ENST00000525167 TRIM68Q6AZZ1 485 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms