RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SRGAP2CP0DJJ0 459 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 CASTP20810 708 aaKnown RBP8.11□□□□□ -1.11
NEDD8-203ENST00000524927 CSRP1P21291 193 aaKnown RBP8.11□□□□□ -1.11
NEDD8-203ENST00000524927 CNR2P34972 360 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 RPS9P46781 194 aaKnown RBP8.11□□□□□ -1.11
NEDD8-203ENST00000524927 PTPN14Q15678 1187 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 KIZQ2M2Z5 673 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 PLPP4Q5VZY2 271 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 MBLAC2Q68D91 279 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 TMEM52Q8NDY8 209 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 SCFD2Q8WU76 684 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 RSAD2Q8WXG1 361 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 FAM168AQ92567 244 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 CLDN23Q96B33 292 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 SLAMF8Q9P0V8 285 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 TNFRSF10DQ9UBN6 386 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 COL12A1Q99715 3063 aa8.11□□□□□ -1.11
NEDD8-203ENST00000524927 C7orf72A4D263 438 aa8.1□□□□□ -1.11
NEDD8-203ENST00000524927 DBX1A6NMT0 343 aa8.1□□□□□ -1.11
NEDD8-203ENST00000524927 HIDE1A8MVS5 230 aa8.1□□□□□ -1.11
NEDD8-203ENST00000524927 RPL11P62913 178 aaKnown RBP8.1□□□□□ -1.11
NEDD8-203ENST00000524927 DUSP4Q13115 394 aa8.1□□□□□ -1.11
NEDD8-203ENST00000524927 PAK1Q13153 545 aa8.1□□□□□ -1.11
NEDD8-203ENST00000524927 PCBP1Q15365 356 aaKnown RBP eCLIP8.1□□□□□ -1.11
NEDD8-203ENST00000524927 TWISTNBQ3B726 338 aaPredicted RBP8.1□□□□□ -1.11
NEDD8-203ENST00000524927 PIK3R6Q5UE93 754 aa8.1□□□□□ -1.11
NEDD8-203ENST00000524927 CDCA2Q69YH5 1023 aaPredicted RBP8.1□□□□□ -1.11
NEDD8-203ENST00000524927 DDX53Q86TM3 631 aaKnown RBP8.1□□□□□ -1.11
NEDD8-203ENST00000524927 CCDC146Q8IYE0 955 aa8.1□□□□□ -1.11
NEDD8-203ENST00000524927 MYADMQ96S97 322 aa8.1□□□□□ -1.11
NEDD8-203ENST00000524927 TCF25Q9BQ70 676 aa8.1□□□□□ -1.11
NEDD8-203ENST00000524927 ENTPD7Q9NQZ7 604 aa8.1□□□□□ -1.11
NEDD8-203ENST00000524927 HOMER2Q9NSB8 354 aa8.1□□□□□ -1.11
NEDD8-203ENST00000524927 ADD3Q9UEY8 706 aaKnown RBP8.1□□□□□ -1.11
NEDD8-203ENST00000524927 PUF60Q9UHX1 559 aaKnown RBP8.1□□□□□ -1.11
NEDD8-203ENST00000524927 NAV1Q8NEY1 1877 aa8.1□□□□□ -1.11
NEDD8-203ENST00000524927 IL16Q14005 1332 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 HAS3O00219 553 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 NCAM2O15394 837 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 EEF2P13639 858 aaKnown RBP8.09□□□□□ -1.11
NEDD8-203ENST00000524927 LSAMPQ13449 338 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 UBXN2BQ14CS0 331 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 ZBTB41Q5SVQ8 909 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 DAB2IPQ5VWQ8 1189 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 ZCCHC8Q6NZY4 707 aaKnown RBP8.09□□□□□ -1.11
NEDD8-203ENST00000524927 GPR149Q86SP6 731 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 ATG4DQ86TL0 474 aaPredicted RBP8.09□□□□□ -1.11
NEDD8-203ENST00000524927 C12orf76Q8N812 135 aaPredicted RBP8.09□□□□□ -1.11
NEDD8-203ENST00000524927 MRPS27Q92552 414 aaKnown RBP8.09□□□□□ -1.11
NEDD8-203ENST00000524927 MAP6Q96JE9 813 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 NELL2Q99435 816 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 CCDC8Q9H0W5 538 aaPredicted RBP8.09□□□□□ -1.11
NEDD8-203ENST00000524927 ADAMTS10Q9H324 1103 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 RNF146Q9NTX7 359 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 CYP39A1Q9NYL5 469 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 SAMD15Q9P1V8 674 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 EPS15L1Q9UBC2 864 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 ATP8A1Q9Y2Q0 1164 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 ZNF281Q9Y2X9 895 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 MTF2Q9Y483 593 aaPredicted RBP8.09□□□□□ -1.11
NEDD8-203ENST00000524927 SHROOM3Q8TF72 1996 aa8.09□□□□□ -1.11
NEDD8-203ENST00000524927 A0A1W2PQ27 194 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 A0A1W2PQ64 194 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 A0A1W2PQC6 194 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 A0A1W2PQD8 194 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 CAPN9O14815 690 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 F2P00734 622 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 SOD2P04179 222 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 TXNP10599 105 aaKnown RBP8.08□□□□□ -1.12
NEDD8-203ENST00000524927 CPEP16870 476 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 POU3F2P20265 443 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-203ENST00000524927 IL15P40933 162 aaPredicted RBP8.08□□□□□ -1.12
NEDD8-203ENST00000524927 BCL6P41182 706 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 TIMM10P62072 90 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 DYNLL1P63167 89 aaKnown RBP8.08□□□□□ -1.12
NEDD8-203ENST00000524927 MESP2Q0VG99 397 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 SCAPQ12770 1279 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 DGKDQ16760 1214 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 KIAA0753Q2KHM9 967 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 LETM2Q2VYF4 491 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 RALGPS1Q5JS13 557 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 WWC2Q6AWC2 1192 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 CILP2Q8IUL8 1156 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 THNSL1Q8IYQ7 743 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 ATL2Q8NHH9 583 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 LOXL4Q96JB6 756 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 CCDC17Q96LX7 622 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 ALPK1Q96QP1 1244 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 LTB4R2Q9NPC1 389 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.08□□□□□ -1.12
NEDD8-203ENST00000524927 SWAP70Q9UH65 585 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 MCM8Q9UJA3 840 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 PTPRQQ9UMZ3 2332 aa8.08□□□□□ -1.12
NEDD8-203ENST00000524927 MYH7BA7E2Y1 1941 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 FADS2P1A8MWK0 482 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 FAM47E-STBD1D6RA91 191 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 H0Y626 953 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 CLASP2O75122 1294 aaKnown RBP8.07□□□□□ -1.12
NEDD8-203ENST00000524927 TRIM16O95361 564 aa8.07□□□□□ -1.12
NEDD8-203ENST00000524927 NPTXRO95502 500 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms