RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 KLF1Q13351 362 aaPredicted RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 NBPF8Q3BBV2 869 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 C3orf36Q3SXR2 165 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 CD300EQ496F6 205 aaPredicted RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 PABPC1LQ4VXU2 614 aaKnown RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 UTP14CQ5TAP6 766 aaKnown RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 MEX3CQ5U5Q3 659 aaKnown RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 KAZNQ674X7 775 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 GGT6Q6P531 493 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 FOXR2Q6PJQ5 311 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 ZNF365Q70YC5 407 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 BRINP3Q76B58 766 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 RHOT1Q8IXI2 618 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 CFAP52Q8N1V2 620 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 NSUN7Q8NE18 718 aaKnown RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 POC1BQ8TC44 478 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 HASPINQ8TF76 798 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 SSH1Q8WYL5 1049 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 DDB2Q92466 427 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 JADE3Q92613 823 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 TMEM125Q96AQ2 219 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 C7orf25Q9BPX7 421 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 MANSC1Q9H8J5 431 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 MRPS18AQ9NVS2 196 aaKnown RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 JKAMPQ9P055 326 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 INTUQ9ULD6 942 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 DNM3Q9UQ16 869 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 DMTF1Q9Y222 760 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 ADGRA2Q96PE1 1338 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 LRPPRCP42704 1394 aaKnown RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 BCL9O00512 1426 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 ADAMTS13Q76LX8 1427 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 RRBP1Q9P2E9 1410 aaKnown RBP2.33□□□□□ -2.04
CD44-212ENST00000524922 ADGRL2O95490 1459 aa2.33□□□□□ -2.04
CD44-212ENST00000524922 CDC42BPGQ6DT37 1551 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 CROCC2H7BZ55 1655 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 XRN1Q8IZH2 1706 aaKnown RBP2.32□□□□□ -2.04
CD44-212ENST00000524922 RGPD3A6NKT7 1758 aaPredicted RBP2.32□□□□□ -2.04
CD44-212ENST00000524922 RGPD4Q7Z3J3 1758 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 CCDC151A5D8V7 595 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 E7ENX8 843 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 TP73O15350 636 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 HTRA2O43464 458 aaPredicted RBP2.32□□□□□ -2.04
CD44-212ENST00000524922 SGTAO43765 313 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 PRKCGP05129 697 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 RHOP08100 348 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 PPP3CBP16298 524 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 ATF3P18847 181 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 YY1P25490 414 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 ZNF81P51508 661 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 RPS7P62081 194 aaKnown RBP2.32□□□□□ -2.04
CD44-212ENST00000524922 DSC2Q02487 901 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 TAP2Q03519 686 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 SRSF4Q08170 494 aaKnown RBP2.32□□□□□ -2.04
CD44-212ENST00000524922 IL10RAQ13651 578 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 HLXQ14774 488 aaPredicted RBP2.32□□□□□ -2.04
CD44-212ENST00000524922 C11orf87Q6NUJ2 197 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 ZNF782Q6ZMW2 699 aaPredicted RBP2.32□□□□□ -2.04
CD44-212ENST00000524922 PTF1AQ7RTS3 328 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 BHLHA9Q7RTU4 235 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 GRASPQ7Z6J2 395 aaPredicted RBP2.32□□□□□ -2.04
CD44-212ENST00000524922 CLNKQ7Z7G1 428 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 FAM109AQ8N4B1 249 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 PDPRQ8NCN5 879 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 NLGN4YQ8NFZ3 816 aaPredicted RBP2.32□□□□□ -2.04
CD44-212ENST00000524922 WDR66Q8TBY9 1149 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 PGBD1Q96JS3 809 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 CPNE5Q9HCH3 593 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 ETAA1Q9NY74 926 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 FLRT1Q9NZU1 646 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 SERPINB13Q9UIV8 391 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 CDYLQ9Y232 598 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 PCDHA13Q9Y5I0 950 aa2.32□□□□□ -2.04
CD44-212ENST00000524922 CHD2O14647 1828 aaKnown RBP2.32□□□□□ -2.04
CD44-212ENST00000524922 PIK3C2BO00750 1634 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 IQGAP3Q86VI3 1631 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 CCDC195A0A1B0GUA6 201 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 WDR91A4D1P6 747 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 LINC01548A6NM66 108 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 PROB1E7EW31 1015 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 ZNF213O14771 459 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 KIF3BO15066 747 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 KCNAB3O43448 404 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 NDUFS2O75306 463 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 CD1AP06126 327 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 NHLRC4P0CG21 123 aaPredicted RBP2.31□□□□□ -2.04
CD44-212ENST00000524922 TSPY4P0CV99 314 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 TSPY10P0CW01 314 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 JUPP14923 745 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 GPD1P21695 349 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 IARSP41252 1262 aaKnown RBP2.31□□□□□ -2.04
CD44-212ENST00000524922 FXR1P51114 621 aaKnown RBP eCLIP2.31□□□□□ -2.04
CD44-212ENST00000524922 SOX10P56693 466 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 C1QTNF8P60827 252 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 MAPK7Q13164 816 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 TSTD2Q5T7W7 516 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 RNF219Q5W0B1 726 aaPredicted RBP2.31□□□□□ -2.04
CD44-212ENST00000524922 FCRLBQ6BAA4 426 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 SDE2Q6IQ49 451 aa2.31□□□□□ -2.04
CD44-212ENST00000524922 ZNF66Q6ZN08 573 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms