RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 GABRR2P28476 465 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 VIPR2P41587 438 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 PRKCQQ04759 706 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 STXBP5Q5T5C0 1151 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 VITQ6UXI7 678 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 ALYREFQ86V81 257 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 KBTBD7Q8WVZ9 684 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 CCDC47Q96A33 483 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 RSPRY1Q96DX4 576 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 SHDQ96IW2 340 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 PHOX2BQ99453 314 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 MKNK1Q9BUB5 465 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 DDX23Q9BUQ8 820 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 FOXQ1Q9C009 403 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 IL21Q9HBE4 155 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 FAM86C1Q9NVL1 165 aa11.98□□□□□ -0.49
TRAPPC4-204ENST00000524797 H0Y858 1186 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 PDXKO00764 312 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 RHOBTB3O94955 611 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 ZNF202O95125 648 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 CST3P01034 146 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 NR3C1P04150 777 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 PCSK1P29120 753 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 CASP4P49662 377 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 GPR15P49685 360 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 NUCB2P80303 420 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 CCDC142Q17RM4 750 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 GPR158Q5T848 1215 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 TMEM174Q8WUU8 243 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 DEPDC1BQ8WUY9 529 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 ATOH1Q92858 354 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 DNASE1L2Q92874 299 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 IPO9Q96P70 1041 aaKnown RBP11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 ATXN3LQ9H3M9 355 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 SLITRK6Q9H5Y7 841 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 ABCB6Q9NP58 842 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 GTF3C4Q9UKN8 822 aa11.97□□□□□ -0.49
TRAPPC4-204ENST00000524797 HELZP42694 1942 aaKnown RBP11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 MYBPHLA2RUH7 354 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 LRRIQ3A6PVS8 624 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 HEPACAM2A8MVW5 462 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 CYP2F1P24903 491 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 CDC25CP30307 473 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 MRE11P49959 708 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 CYP4F8P98187 520 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 TAF12Q16514 161 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 ARHGAP15Q53QZ3 475 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 FAM171BQ6P995 826 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 PJA1Q8NG27 643 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 E2F7Q96AV8 911 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 SYT15Q9BQS2 421 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 MRPL45Q9BRJ2 306 aaKnown RBP11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 TRMT61BQ9BVS5 477 aaKnown RBP11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 CDH9Q9ULB4 789 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 SIT1Q9Y3P8 196 aa11.96□□□□□ -0.49
TRAPPC4-204ENST00000524797 KANSL1LA0AUZ9 987 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 CALUO43852 315 aaPredicted RBP11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 ATP2C2O75185 946 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 STAU1O95793 577 aaKnown RBP11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 DCNP07585 359 aaKnown RBP11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 HMGA1P17096 107 aaKnown RBP11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 PSMC3P17980 439 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 LMO2P25791 158 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 WEE1P30291 646 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 GDI1P31150 447 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 MYL6P60660 151 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 RPL10AP62906 217 aaKnown RBP11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 TRPC3Q13507 836 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 KCNB1Q14721 858 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 SDHAF4Q5VUM1 108 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 TPRG1Q6ZUI0 275 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 SPATA2LQ8IUW3 424 aaPredicted RBP11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 MFSD6LQ8IWD5 586 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 STKLD1Q8NE28 680 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 PARD3BQ8TEW8 1205 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 GCNAQ96QF7 691 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 MMS19Q96T76 1030 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 TASP1Q9H6P5 420 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 BRD9Q9H8M2 597 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 CRTAC1Q9NQ79 661 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 DLGAP2Q9P1A6 1054 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 NME7Q9Y5B8 376 aa11.96□□□□□ -0.5
TRAPPC4-204ENST00000524797 SLC38A8A6NNN8 435 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 PHACTR2O75167 634 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 LRRN2O75325 713 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 TACC1O75410 805 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 NOL4O94818 638 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 KIF20AO95235 890 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 F11P03951 625 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 FAM163BP0C2L3 166 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 CSH1P0DML2 217 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 CSH2P0DML3 217 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 ATICP31939 592 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 AP3M2P53677 418 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 PSMC1P62191 440 aaKnown RBP11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 TNNC1P63316 161 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 CLDN10P78369 228 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 NFIL3Q16649 462 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 DDR2Q16832 855 aa11.95□□□□□ -0.5
TRAPPC4-204ENST00000524797 TDRD10Q5VZ19 366 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms