RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 KRT7P08729 469 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 ZSCAN5DPP0CG00 497 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 KRT15P19012 456 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 PSMA2P25787 234 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 PHBP35232 272 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 TNFSF9P41273 254 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 ASPAP45381 313 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 ARL4CP56559 192 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 MYL6P60660 151 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 SP2Q02086 613 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 SLC25A11Q02978 314 aaKnown RBP9.39□□□□□ -0.91
PKP3-202ENST00000524646 PDIA2Q13087 525 aaKnown RBP9.39□□□□□ -0.91
PKP3-202ENST00000524646 MOGSQ13724 837 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 E2F5Q15329 346 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 PKN2Q16513 984 aaKnown RBP9.39□□□□□ -0.91
PKP3-202ENST00000524646 TAZQ16635 292 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 KLHL38Q2WGJ6 581 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 ATP13A4Q4VNC1 1196 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 SCARA5Q6ZMJ2 495 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 FAM47EQ6ZV65 393 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 ERICH1Q86X53 443 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 PPIL6Q8IXY8 311 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 FITM2Q8N6M3 262 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 FNIP1Q8TF40 1166 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 ACSF2Q96CM8 615 aaPredicted RBP9.39□□□□□ -0.91
PKP3-202ENST00000524646 HAUS1Q96CS2 278 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 L3MBTL3Q96JM7 780 aaPredicted RBP9.39□□□□□ -0.91
PKP3-202ENST00000524646 RAB3IPQ96QF0 476 aaPredicted RBP9.39□□□□□ -0.91
PKP3-202ENST00000524646 PCYT2Q99447 389 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 C2orf40Q9H1Z8 148 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 LRMDAQ9H2I8 198 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 ARHGEF3Q9NR81 526 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 NRBP2Q9NSY0 501 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 NOP53Q9NZM5 478 aaKnown RBP9.39□□□□□ -0.91
PKP3-202ENST00000524646 GGT7Q9UJ14 662 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 USH1CQ9Y6N9 552 aa9.39□□□□□ -0.91
PKP3-202ENST00000524646 C3orf70A6NLC5 250 aaPredicted RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 E7ESA3 106 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 F8VP50 259 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 NFKBIEO00221 500 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 MED7O43513 233 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 MSCO60682 206 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 MAFO75444 373 aaPredicted RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 DCTN3O75935 186 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 ATP5HO75947 161 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 UNC5CO95185 931 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 ZWINTO95229 277 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 TNNC2P02585 160 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 KRT16P08779 473 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 HOXC6P09630 235 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 ETS1P14921 441 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 CA4P22748 312 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 EIF4BP23588 611 aaKnown RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 EDNRBP24530 442 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 POLR2BP30876 1174 aaKnown RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 CTCFP49711 727 aaPredicted RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 YARSP54577 528 aaKnown RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 OTUD4Q01804 1114 aaKnown RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 TRPC3Q13507 836 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 SETDB1Q15047 1291 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 HADHQ16836 314 aaKnown RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 DUOXA2Q1HG44 320 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 SGSM1Q2NKQ1 1148 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 PTPN20Q4JDL3 420 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 SEZ6Q53EL9 994 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 SPDYAQ5MJ70 313 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 CYP4A22Q5TCH4 519 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 HHATQ5VTY9 493 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 IER5Q5VY09 327 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 TXNRD3NBQ6F5E7 133 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 DENND1BQ6P3S1 775 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 TLDC1Q6P9B6 456 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 MPZL3Q6UWV2 235 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 ZBTB33Q86T24 672 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 ZBED8Q8IZ13 594 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 AGGF1Q8N302 714 aaeCLIP9.38□□□□□ -0.912e-8■■■■■ 47.7
PKP3-202ENST00000524646 KIF2BQ8N4N8 673 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 LRRC8CQ8TDW0 803 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 C10orf82Q8WW14 230 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 TFAP2BQ92481 460 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 N4BP2L2Q92802 583 aaPredicted RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 STAMBPL1Q96FJ0 436 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 ACO2Q99798 780 aaKnown RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 PAIP2Q9BPZ3 127 aaKnown RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 DHRS4Q9BTZ2 278 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 PITPNM3Q9BZ71 974 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 MYLK2Q9H1R3 596 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 CXorf56Q9H5V9 222 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 ACSS3Q9H6R3 686 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 EBF2Q9HAK2 575 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 KIF9Q9HAQ2 790 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 PIM2Q9P1W9 311 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 WDR35Q9P2L0 1181 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 CPSF3Q9UKF6 684 aaKnown RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 PHTF1Q9UMS5 762 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 AGTPBP1Q9UPW5 1226 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.38□□□□□ -0.91
PKP3-202ENST00000524646 C15orf41Q9Y2V0 281 aa9.38□□□□□ -0.91
PKP3-202ENST00000524646 LTBP3Q9NS15 1303 aa9.37□□□□□ -0.91
PKP3-202ENST00000524646 SIGLEC16A6NMB1 481 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms