RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 SGK1O00141 431 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 PMM2O15305 246 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 PDGFRAP16234 1089 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 HSD17B3P37058 310 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 COILP38432 576 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-216ENST00000524481 RPL21P46778 160 aaKnown RBP12.42□□□□□ -0.42
PTPRK-216ENST00000524481 GOLGA7BQ2TAP0 167 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 CCDC38Q502W7 563 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 ZNF677Q86XU0 584 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 SLC4A11Q8NBS3 891 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 MORC4Q8TE76 937 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 TRIM11Q96F44 468 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 MED10Q9BTT4 135 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 OSBPL7Q9BZF2 842 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 SNX25Q9H3E2 840 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 HEY1Q9Y5J3 304 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 SCINQ9Y6U3 715 aa12.42□□□□□ -0.42
PTPRK-216ENST00000524481 MED7O43513 233 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 OPA1O60313 960 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 PHF2O75151 1096 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 DARSP14868 501 aaKnown RBP12.41□□□□□ -0.42
PTPRK-216ENST00000524481 YWHAEP62258 255 aaKnown RBP12.41□□□□□ -0.42
PTPRK-216ENST00000524481 UBAP2Q5T6F2 1119 aaKnown RBP12.41□□□□□ -0.42
PTPRK-216ENST00000524481 ANKS1BQ7Z6G8 1248 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 BEST2Q8NFU1 509 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 FAM71BQ8TC56 605 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 IPO4Q8TEX9 1081 aaKnown RBP12.41□□□□□ -0.42
PTPRK-216ENST00000524481 CLDN5O00501 218 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 ERBB2P04626 1255 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 CALB1P05937 261 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 CD48P09326 243 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 PROZP22891 400 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 YY1P25490 414 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 SMAD1Q15797 465 aaKnown RBP12.41□□□□□ -0.42
PTPRK-216ENST00000524481 LEKR1Q6ZMV7 388 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 TRIB2Q92519 343 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 SEMA4AQ9H3S1 761 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 IP6K2Q9UHH9 426 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 OTOFQ9HC10 1997 aa12.41□□□□□ -0.42
PTPRK-216ENST00000524481 DICER1Q9UPY3 1922 aaKnown RBP12.41□□□□□ -0.42
PTPRK-216ENST00000524481 FOXO6A8MYZ6 492 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 AKR1A1P14550 325 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 MLH1P40692 756 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 ITIH3Q06033 890 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 PDCLQ13371 301 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 MFSD14CQ5VZR4 134 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 C17orf99Q6UX52 265 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 TRIM72Q6ZMU5 477 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 RFX6Q8HWS3 928 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 RASGEF1CQ8N431 466 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 CALR3Q96L12 384 aaKnown RBP12.4□□□□□ -0.42
PTPRK-216ENST00000524481 CFAP57Q96MR6 1250 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 TMEM121Q9BTD3 319 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 MAK16Q9BXY0 300 aaKnown RBP12.4□□□□□ -0.42
PTPRK-216ENST00000524481 SLITRK6Q9H5Y7 841 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 ASB7Q9H672 318 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 NOVA2Q9UNW9 492 aaKnown RBP12.4□□□□□ -0.42
PTPRK-216ENST00000524481 GNEQ9Y223 722 aaKnown RBP12.4□□□□□ -0.42
PTPRK-216ENST00000524481 CDY2AQ9Y6F7 541 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 TRIP12Q14669 1992 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-216ENST00000524481 SMIM28A0A1B0GU29 152 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 C1orf228Q6PIY5 440 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 TTC16Q8NEE8 873 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 XPNPEP3Q9NQH7 507 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 TMEM59LQ9UK28 342 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 PARP14Q460N5 1801 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 F2P00734 622 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 MYZAPP0CAP1 466 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 CCND3P30281 292 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-216ENST00000524481 CHRNA3P32297 505 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 GNL1P36915 607 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-216ENST00000524481 GABPB1Q06547 395 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-216ENST00000524481 MMRN1Q13201 1228 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 SLC29A2Q14542 456 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 CTU1Q7Z7A3 348 aaKnown RBP12.4□□□□□ -0.42
PTPRK-216ENST00000524481 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-216ENST00000524481 CLEC4CQ8WTT0 213 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 LRRC45Q96CN5 670 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 C9orf72Q96LT7 481 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 SELENOSQ9BQE4 189 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 MAGEB5Q9BZ81 275 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 LRRC4CQ9HCJ2 640 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 PPANQ9NQ55 473 aaKnown RBP12.4□□□□□ -0.42
PTPRK-216ENST00000524481 MTRF1LQ9UGC7 380 aaKnown RBP12.4□□□□□ -0.42
PTPRK-216ENST00000524481 RSPH14Q9UHP6 348 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 ST3GAL5Q9UNP4 418 aa12.4□□□□□ -0.42
PTPRK-216ENST00000524481 CST8O60676 142 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 HUS1O60921 280 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 GAS8O95995 478 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 ASGR1P07306 291 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 MYBL1P10243 752 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
PTPRK-216ENST00000524481 GUCY1A3Q02108 690 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 MORN1Q5T089 497 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 MLXIPLQ9NP71 852 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 MED4Q9NPJ6 270 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 DNPEPQ9ULA0 475 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 BARX2Q9UMQ3 279 aaPredicted RBP12.39□□□□□ -0.43
PTPRK-216ENST00000524481 PASKQ96RG2 1323 aa12.39□□□□□ -0.43
PTPRK-216ENST00000524481 LCTP09848 1927 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms