RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 DUOXA2Q1HG44 320 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 MEI1Q5TIA1 1274 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 ATF7IP2Q5U623 682 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 C11orf63Q6NUN7 778 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 AGMOQ6ZNB7 445 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 RBM23Q86U06 439 aaKnown RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 ZNF280BQ86YH2 543 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 THNSL1Q8IYQ7 743 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 LRRC43Q8N309 656 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 LRRC57Q8N9N7 239 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 SMG8Q8ND04 991 aaKnown RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 SPPL3Q8TCT6 385 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 TAS1R2Q8TE23 839 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 BCL7CQ8WUZ0 217 aaPredicted RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 POF1BQ8WVV4 589 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 HNRNPLLQ8WVV9 542 aaKnown RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 SAAL1Q96ER3 474 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 PKNOX2Q96KN3 472 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 NECAB3Q96P71 396 aaPredicted RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 AGPAT1Q99943 283 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 TARS2Q9BW92 718 aaKnown RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 CARD6Q9BX69 1037 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 COL25A1Q9BXS0 654 aaPredicted RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 NXF3Q9H4D5 531 aaKnown RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 ASB7Q9H672 318 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 VRTNQ9H8Y1 702 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 UBE2TQ9NPD8 197 aaPredicted RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 DNAJB4Q9UDY4 337 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 NOCTQ9UK39 431 aaKnown RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 DERAQ9Y315 318 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 RWDD3Q9Y3V2 267 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 IPPQ9Y573 584 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 TRIP11Q15643 1979 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 MACROD2A1Z1Q3 448 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 MIF4GDA9UHW6 222 aaKnown RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 H3BQ06 376 aaPredicted RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 FOXN3O00409 490 aaPredicted RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 DLL1O00548 723 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 RRP9O43818 475 aaKnown RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 RTN2O75298 545 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 DDHD2O94830 711 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 LSM8O95777 96 aaKnown RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 EOMESO95936 686 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 ASS1P00966 412 aaKnown RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 RB1P06400 928 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 CLTAP09496 248 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 LAG3P18627 525 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 KCNA5P22460 613 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 AKAP5P24588 427 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 AXLP30530 894 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 ATICP31939 592 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 CA8P35219 290 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 MLH1P40692 756 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 RAB27AP51159 221 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 BCAR1P56945 870 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 ERVFC1P60507 584 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 CDR2Q01850 454 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 RNASELQ05823 741 aaKnown RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 HYAL1Q12794 435 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 BRD3Q15059 726 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 PPP2R5EQ16537 467 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 TMEM132AQ24JP5 1023 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 DCAF4L1Q3SXM0 396 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 TIGD5Q53EQ6 642 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 GLE1Q53GS7 698 aaKnown RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 NOMO2Q5JPE7 1267 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 TDRD10Q5VZ19 366 aaKnown RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 PLPP4Q5VZY2 271 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 EEF1DP3Q658K8 133 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 CCDC70Q6NSX1 233 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 WDR93Q6P2C0 686 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 BRICD5Q6PL45 260 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 KCNT2Q6UVM3 1135 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 TMEM173Q86WV6 379 aaPredicted RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 PPM1KQ8N3J5 372 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 AUTS2Q8WXX7 1259 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 CCDC127Q96BQ5 260 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 VCPIP1Q96JH7 1222 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 PBKQ96KB5 322 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 ZFP42Q96MM3 310 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 KREMEN1Q96MU8 473 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 ZNF558Q96NG5 402 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 ASB2Q96Q27 587 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.54□□□□□ -1.2
VPS11-201ENST00000524454 PLVAPQ9BX97 442 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 CXCL16Q9H2A7 254 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 NSUN3Q9H649 340 aaKnown RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 NRDE2Q9H7Z3 1164 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 UBE2ZQ9H832 354 aaPredicted RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 AVENQ9NQS1 362 aaPredicted RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 TBC1D13Q9NVG8 400 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 LMCD1Q9NZU5 365 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 KLK14Q9P0G3 267 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 UVRAGQ9P2Y5 699 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 CACNG4Q9UBN1 327 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 LIMD1Q9UGP4 676 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 AJAP1Q9UKB5 411 aaPredicted RBP7.54□□□□□ -1.2
VPS11-201ENST00000524454 GTF3C4Q9UKN8 822 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 RAB21Q9UL25 225 aa7.54□□□□□ -1.2
VPS11-201ENST00000524454 TTC7AQ9ULT0 858 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms