RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 FNIP2Q9P278 1114 aa11.92□□□□□ -0.5
CDK16-221ENST00000523543 NOCTQ9UK39 431 aaKnown RBP11.92□□□□□ -0.5
CDK16-221ENST00000523543 KIAA1257Q9ULG3 409 aa11.92□□□□□ -0.5
CDK16-221ENST00000523543 GBF1Q92538 1859 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 SZT2Q5T011 3432 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.91□□□□□ -0.5
CDK16-221ENST00000523543 MYBPHLA2RUH7 354 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 C2orf71A6NGG8 1288 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 GOLGA6L6A8MZA4 724 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 O00370 1275 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 SOX1O00570 391 aaPredicted RBP11.91□□□□□ -0.5
CDK16-221ENST00000523543 C2CD2LO14523 706 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 ADAM12O43184 909 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 LPXNO60711 386 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 CCDC172P0C7W6 258 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 VDRP11473 427 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 CYP11B1P15538 503 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 GNA15P30679 374 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 GSDMDP57764 484 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 PTK2Q05397 1052 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 SMARCB1Q12824 385 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 SMC1AQ14683 1233 aaKnown RBP11.91□□□□□ -0.5
CDK16-221ENST00000523543 BMS1Q14692 1282 aaKnown RBP11.91□□□□□ -0.5
CDK16-221ENST00000523543 MAPRE1Q15691 268 aaKnown RBP11.91□□□□□ -0.5
CDK16-221ENST00000523543 ASIC2Q16515 512 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 CCDC142Q17RM4 750 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 PLPP4Q5VZY2 271 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 WDR59Q6PJI9 974 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 TMC7Q7Z402 723 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 LRRTM3Q86VH5 581 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 MRPL43Q8N983 215 aaKnown RBP11.91□□□□□ -0.5
CDK16-221ENST00000523543 C12orf29Q8N999 325 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 OLIG1Q8TAK6 271 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 TFAP2BQ92481 460 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 DDX1Q92499 740 aaKnown RBP11.91□□□□□ -0.5
CDK16-221ENST00000523543 PANX2Q96RD6 677 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 ZNF576Q9H609 170 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 ACP6Q9NPH0 428 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 CDY1Q9Y6F8 540 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 VWA8A3KMH1 1905 aa11.91□□□□□ -0.5
CDK16-221ENST00000523543 TEX28O15482 410 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 CXCL14O95715 111 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 CALCAP01258 141 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 SERPING1P05155 500 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 CNPP09543 421 aaKnown RBP11.9□□□□□ -0.5
CDK16-221ENST00000523543 OR4Q2P0C623 313 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 CD19P15391 556 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 RPL17P18621 184 aaKnown RBP11.9□□□□□ -0.5
CDK16-221ENST00000523543 BRD2P25440 801 aaKnown RBP11.9□□□□□ -0.5
CDK16-221ENST00000523543 IRS1P35568 1242 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 NDUFV1P49821 464 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 PDE6CP51160 858 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 CDK17Q00537 523 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 ROR1Q01973 937 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 ARID5AQ03989 594 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 GPR17Q13304 367 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 RAB33AQ14088 237 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 STILQ15468 1287 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 NFE2Q16621 373 aaPredicted RBP11.9□□□□□ -0.5
CDK16-221ENST00000523543 SGO2Q562F6 1265 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 MDH1BQ5I0G3 518 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 NOP9Q86U38 636 aaKnown RBP11.9□□□□□ -0.5
CDK16-221ENST00000523543 ZNF677Q86XU0 584 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 GPIHBP1Q8IV16 184 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 DCP1BQ8IZD4 617 aaKnown RBP11.9□□□□□ -0.5
CDK16-221ENST00000523543 FUKQ8N0W3 1084 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 MYLPFQ96A32 169 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 PCED1BQ96HM7 432 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 HEXIM2Q96MH2 286 aaKnown RBP11.9□□□□□ -0.5
CDK16-221ENST00000523543 PPP1R9BQ96SB3 815 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 HNRNPABQ99729 332 aaKnown RBP11.9□□□□□ -0.5
CDK16-221ENST00000523543 LPIN3Q9BQK8 851 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 TTYH1Q9H313 450 aaPredicted RBP11.9□□□□□ -0.5
CDK16-221ENST00000523543 TMLHEQ9NVH6 421 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 GTF3C4Q9UKN8 822 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 PCDHGC5Q9Y5F6 944 aa11.9□□□□□ -0.5
CDK16-221ENST00000523543 BZW2Q9Y6E2 419 aaKnown RBP11.9□□□□□ -0.5
CDK16-221ENST00000523543 NLRC5Q86WI3 1866 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 WDR27A2RRH5 827 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 MTMR11A4FU01 709 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 HIDE1A8MVS5 230 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 THAP12O43422 761 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 VNN2O95498 520 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 C1RP00736 705 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 CCDC130P13994 396 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 CPB1P15086 417 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 CHRNB2P17787 502 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 ANXA13P27216 316 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 OR1D2P34982 312 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 CDR2Q01850 454 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 KLHL30Q0D2K2 578 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 CCDC173Q0VFZ6 552 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 CNGA2Q16280 664 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 TSR1Q2NL82 804 aaKnown RBP11.89□□□□□ -0.51
CDK16-221ENST00000523543 CFAP221Q4G0U5 840 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 SLC39A12Q504Y0 691 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 PKDCCQ504Y2 493 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 PPP1R26Q5T8A7 1209 aaPredicted RBP11.89□□□□□ -0.51
CDK16-221ENST00000523543 TPGS2Q68CL5 300 aa11.89□□□□□ -0.51
CDK16-221ENST00000523543 LCLAT1Q6UWP7 414 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms