RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 RMND1Q9NWS8 449 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 CDH9Q9ULB4 789 aa18.49■□□□□ 0.55
CCNC-213ENST00000523541 NR3C1P04150 777 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 CDC25CP30307 473 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 ARHGAP15Q53QZ3 475 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 TANGO2Q6ICL3 276 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 C4orf50Q6ZRC1 276 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 DTWD2Q8NBA8 298 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 SHKBP1Q8TBC3 707 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 ZNF516Q92618 1163 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 DNASE1L2Q92874 299 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 GSDMAQ96QA5 445 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 NELL2Q99435 816 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 PKMYT1Q99640 499 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 GDPD2Q9HCC8 539 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 ABI2Q9NYB9 513 aaPredicted RBP18.48■□□□□ 0.55
CCNC-213ENST00000523541 CIZ1Q9ULV3 898 aaPredicted RBP18.48■□□□□ 0.55
CCNC-213ENST00000523541 SIT1Q9Y3P8 196 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 TCHHQ07283 1943 aa18.48■□□□□ 0.55
CCNC-213ENST00000523541 PHACTR2O75167 634 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 SOAT2O75908 522 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 DCNP07585 359 aaKnown RBP18.47■□□□□ 0.55
CCNC-213ENST00000523541 CSH1P0DML2 217 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 CSH2P0DML3 217 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 PSMC3P17980 439 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 FCARP24071 287 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 MAGEA11P43364 429 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 MLLT6P55198 1093 aaPredicted RBP18.47■□□□□ 0.55
CCNC-213ENST00000523541 GRM2Q14416 872 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 UBXN2BQ14CS0 331 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 TEAD2Q15562 447 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 MLF2Q15773 248 aaPredicted RBP18.47■□□□□ 0.55
CCNC-213ENST00000523541 WDR72Q3MJ13 1102 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 SLC44A4Q53GD3 710 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 MFSD6LQ8IWD5 586 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 CCDC105Q8IYK2 499 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 ENGASEQ8NFI3 743 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 IRF7Q92985 503 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 GCNAQ96QF7 691 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 MMS19Q96T76 1030 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 TRMT61BQ9BVS5 477 aaKnown RBP18.47■□□□□ 0.55
CCNC-213ENST00000523541 OSBPL6Q9BZF3 934 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 GZF1Q9H116 711 aaPredicted RBP18.47■□□□□ 0.55
CCNC-213ENST00000523541 BRD9Q9H8M2 597 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 OBP2AQ9NY56 170 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 UXTQ9UBK9 157 aaPredicted RBP18.47■□□□□ 0.55
CCNC-213ENST00000523541 GTF3C4Q9UKN8 822 aa18.47■□□□□ 0.55
CCNC-213ENST00000523541 A0A1W2PRU2 124 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 CLSTN1O94985 981 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 SMC2O95347 1197 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 C4BPAP04003 597 aaKnown RBP18.46■□□□□ 0.55
CCNC-213ENST00000523541 PRR29P0C7W0 189 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 ATF6P18850 670 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 DDX6P26196 483 aaKnown RBP eCLIP18.46■□□□□ 0.55
CCNC-213ENST00000523541 GABRR2P28476 465 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 GNL1P36915 607 aaPredicted RBP18.46■□□□□ 0.55
CCNC-213ENST00000523541 MCCD1P59942 119 aaPredicted RBP18.46■□□□□ 0.55
CCNC-213ENST00000523541 TNNC1P63316 161 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 FAM160A1Q05DH4 1040 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 COBLL1Q53SF7 1204 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 SCARA3Q6AZY7 606 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 POTEHQ6S545 545 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 VSTM1Q6UX27 236 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 GAREM2Q75VX8 874 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 SPATA2LQ8IUW3 424 aaPredicted RBP18.46■□□□□ 0.55
CCNC-213ENST00000523541 YAF2Q8IY57 180 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 TTC9BQ8N6N2 239 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 ZSCAN18Q8TBC5 510 aaPredicted RBP18.46■□□□□ 0.55
CCNC-213ENST00000523541 KBTBD7Q8WVZ9 684 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 TAF4BQ92750 862 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 ZSWIM3Q96MP5 696 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 DDX23Q9BUQ8 820 aaKnown RBP18.46■□□□□ 0.55
CCNC-213ENST00000523541 PLA2G2FQ9BZM2 168 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 FOXQ1Q9C009 403 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 ATXN3LQ9H3M9 355 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 TMLHEQ9NVH6 421 aa18.46■□□□□ 0.55
CCNC-213ENST00000523541 TSC2P49815 1807 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 GLULP15104 373 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 ANGPT1Q15389 498 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 SGSM1Q2NKQ1 1148 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 EDRF1Q3B7T1 1238 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 INTS8Q75QN2 995 aaKnown RBP18.45■□□□□ 0.54
CCNC-213ENST00000523541 OSTM1Q86WC4 334 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 SPATA20Q8TB22 786 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 TRMT2BQ96GJ1 504 aaKnown RBP18.45■□□□□ 0.54
CCNC-213ENST00000523541 FAM84AQ96KN4 292 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 MYRFLQ96LU7 910 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 PI4K2AQ9BTU6 479 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 XYLT2Q9H1B5 865 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 SNX25Q9H3E2 840 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 TASP1Q9H6P5 420 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 EHD2Q9NZN4 543 aa18.45■□□□□ 0.54
CCNC-213ENST00000523541 MAGEC2Q9UBF1 373 aaPredicted RBP18.45■□□□□ 0.54
CCNC-213ENST00000523541 KANSL1LA0AUZ9 987 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 LRRIQ3A6PVS8 624 aaPredicted RBP18.44■□□□□ 0.54
CCNC-213ENST00000523541 P4HA1P13674 534 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 PSMC2P35998 433 aaKnown RBP18.44■□□□□ 0.54
CCNC-213ENST00000523541 MAGEA9P43362 315 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 ADAM9Q13443 819 aa18.44■□□□□ 0.54
CCNC-213ENST00000523541 BIRC3Q13489 604 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms