RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 SPDYE16A6NNV3 312 aaPredicted RBP18.82■□□□□ 0.6
IKBKB-228ENST00000523517 MSCO60682 206 aa18.82■□□□□ 0.6
IKBKB-228ENST00000523517 MSH2P43246 934 aa18.82■□□□□ 0.6
IKBKB-228ENST00000523517 POLNQ7Z5Q5 900 aa18.82■□□□□ 0.6
IKBKB-228ENST00000523517 PCGF5Q86SE9 256 aa18.82■□□□□ 0.6
IKBKB-228ENST00000523517 MRRFQ96E11 262 aaKnown RBP18.82■□□□□ 0.6
IKBKB-228ENST00000523517 L3MBTL3Q96JM7 780 aaPredicted RBP18.82■□□□□ 0.6
IKBKB-228ENST00000523517 HOXC10Q9NYD6 342 aa18.82■□□□□ 0.6
IKBKB-228ENST00000523517 PSMC3IPQ9P2W1 217 aaPredicted RBP18.82■□□□□ 0.6
IKBKB-228ENST00000523517 AGTPBP1Q9UPW5 1226 aa18.82■□□□□ 0.6
IKBKB-228ENST00000523517 STK38LQ9Y2H1 464 aa18.82■□□□□ 0.6
IKBKB-228ENST00000523517 CEP83Q9Y592 693 aa18.82■□□□□ 0.6
IKBKB-228ENST00000523517 A0A1W2PPM1 405 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 GOLGA8SH3BPF8 625 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 GOLGA8MH3BSY2 632 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 MAFO75444 373 aaPredicted RBP18.81■□□□□ 0.6
IKBKB-228ENST00000523517 UBA1P22314 1058 aaKnown RBP18.81■□□□□ 0.6
IKBKB-228ENST00000523517 CA4P22748 312 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 GMPSP49915 693 aaPredicted RBP18.81■□□□□ 0.6
IKBKB-228ENST00000523517 EFNA5P52803 228 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 GPX6P59796 221 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 TRPC3Q13507 836 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 SETDB1Q15047 1291 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 HIF1AQ16665 826 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 PRAMEF18Q5VWM3 479 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 ANKMY2Q8IV38 441 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 N4BP2L2Q92802 583 aaPredicted RBP18.81■□□□□ 0.6
IKBKB-228ENST00000523517 THOC1Q96FV9 657 aaKnown RBP18.81■□□□□ 0.6
IKBKB-228ENST00000523517 MYLK2Q9H1R3 596 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 SLCO1B3Q9NPD5 702 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 TXLNGQ9NUQ3 528 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 SAE1Q9UBE0 346 aaPredicted RBP18.81■□□□□ 0.6
IKBKB-228ENST00000523517 USH1CQ9Y6N9 552 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 A8MUI8 341 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 TYROBPO43914 113 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 BANF1O75531 89 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 PSMA2P25787 234 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 RFC1P35251 1148 aaPredicted RBP18.81■□□□□ 0.6
IKBKB-228ENST00000523517 STAT5BP51692 787 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 MOGSQ13724 837 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 SLC1A5Q15758 541 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 EFHC2Q5JST6 749 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 DENND1BQ6P3S1 775 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 STRIP2Q9ULQ0 834 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 EFR3BQ9Y2G0 817 aa18.81■□□□□ 0.6
IKBKB-228ENST00000523517 OGTO15294 1046 aa18.8■□□□□ 0.6
IKBKB-228ENST00000523517 EDF1O60869 148 aaKnown RBP18.8■□□□□ 0.6
IKBKB-228ENST00000523517 FARP2O94887 1054 aaPredicted RBP18.8■□□□□ 0.6
IKBKB-228ENST00000523517 CTCFP49711 727 aaPredicted RBP18.8■□□□□ 0.6
IKBKB-228ENST00000523517 YARSP54577 528 aaKnown RBP18.8■□□□□ 0.6
IKBKB-228ENST00000523517 GEMIN4P57678 1058 aaKnown RBP18.8■□□□□ 0.6
IKBKB-228ENST00000523517 DYNLT1P63172 113 aa18.8■□□□□ 0.6
IKBKB-228ENST00000523517 SCARA5Q6ZMJ2 495 aa18.8■□□□□ 0.6
IKBKB-228ENST00000523517 ACTL9Q8TC94 416 aa18.8■□□□□ 0.6
IKBKB-228ENST00000523517 LRRC8CQ8TDW0 803 aa18.8■□□□□ 0.6
IKBKB-228ENST00000523517 ACO2Q99798 780 aaKnown RBP18.8■□□□□ 0.6
IKBKB-228ENST00000523517 MAK16Q9BXY0 300 aaKnown RBP18.8■□□□□ 0.6
IKBKB-228ENST00000523517 ZWILCHQ9H900 591 aa18.8■□□□□ 0.6
IKBKB-228ENST00000523517 ETNK1Q9HBU6 452 aa18.8■□□□□ 0.6
IKBKB-228ENST00000523517 PIM2Q9P1W9 311 aa18.8■□□□□ 0.6
IKBKB-228ENST00000523517 RABGEF1Q9UJ41 708 aa18.8■□□□□ 0.6
IKBKB-228ENST00000523517 SNCAIPQ9Y6H5 919 aa18.8■□□□□ 0.6
IKBKB-228ENST00000523517 CLUHO75153 1309 aa18.8■□□□□ 0.6
IKBKB-228ENST00000523517 TNS1Q9HBL0 1735 aaKnown RBP18.8■□□□□ 0.6
IKBKB-228ENST00000523517 ANP32DO95626 131 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 CCND1P24385 295 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 PSMC4P43686 418 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 ASPAP45381 313 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 TFAMQ00059 246 aaKnown RBP18.79■□□□□ 0.6
IKBKB-228ENST00000523517 OTUD4Q01804 1114 aaKnown RBP18.79■□□□□ 0.6
IKBKB-228ENST00000523517 SLC25A11Q02978 314 aaKnown RBP18.79■□□□□ 0.6
IKBKB-228ENST00000523517 ZNF699Q32M78 642 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 HHATQ5VTY9 493 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 PPIL6Q8IXY8 311 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 FRMD8P1Q9BZ68 369 aaPredicted RBP18.79■□□□□ 0.6
IKBKB-228ENST00000523517 C10orf88Q9H8K7 445 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 CPSF3Q9UKF6 684 aaKnown RBP18.79■□□□□ 0.6
IKBKB-228ENST00000523517 PARP14Q460N5 1801 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 WDR81Q562E7 1941 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 LOC102724159A0A0B4J2E5 919 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 SIGLEC16A6NMB1 481 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 KRT7P08729 469 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 KRT3P12035 628 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 GDF10P55107 478 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 GAD2Q05329 585 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 PWP2Q15269 919 aaKnown RBP18.79■□□□□ 0.6
IKBKB-228ENST00000523517 SURF1Q15526 300 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 SMTNL2Q2TAL5 461 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 PTPN20Q4JDL3 420 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 ANKRD22Q5VYY1 191 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 FAM160B1Q5W0V3 765 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 ARFGAP1Q8N6T3 406 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 CHST13Q8NET6 341 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 CPT1BQ92523 772 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 ERP27Q96DN0 273 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 ADAM33Q9BZ11 813 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 PHACTR1Q9C0D0 580 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 XYLT2Q9H1B5 865 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 FETUBQ9UGM5 382 aa18.79■□□□□ 0.6
IKBKB-228ENST00000523517 CHKBQ9Y259 395 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms