RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 SIX4Q9UIU6 781 aa16.24■□□□□ 0.19
PCM1-218ENST00000523055 NDRG2Q9UN36 371 aaKnown RBP16.24■□□□□ 0.19
PCM1-218ENST00000523055 AGAP1Q9UPQ3 857 aa16.24■□□□□ 0.19
PCM1-218ENST00000523055 MRPS17Q9Y2R5 130 aaKnown RBP16.24■□□□□ 0.19
PCM1-218ENST00000523055 PTPRDP23468 1912 aa16.24■□□□□ 0.19
PCM1-218ENST00000523055 ZNF233A6NK53 670 aa16.23■□□□□ 0.19
PCM1-218ENST00000523055 CYB561D2O14569 222 aa16.23■□□□□ 0.19
PCM1-218ENST00000523055 KIAA0391O15091 583 aaKnown RBP16.23■□□□□ 0.19
PCM1-218ENST00000523055 XYLBO75191 536 aa16.23■□□□□ 0.19
PCM1-218ENST00000523055 TYMPP19971 482 aa16.23■□□□□ 0.19
PCM1-218ENST00000523055 SRSF5Q13243 272 aaKnown RBP16.23■□□□□ 0.19
PCM1-218ENST00000523055 PRR23BQ6ZRT6 265 aa16.23■□□□□ 0.19
PCM1-218ENST00000523055 HS2ST1Q7LGA3 356 aa16.23■□□□□ 0.19
PCM1-218ENST00000523055 TTC9BQ8N6N2 239 aa16.23■□□□□ 0.19
PCM1-218ENST00000523055 DNASE1L2Q92874 299 aa16.23■□□□□ 0.19
PCM1-218ENST00000523055 MCRS1Q96EZ8 462 aa16.23■□□□□ 0.19
PCM1-218ENST00000523055 GZF1Q9H116 711 aaPredicted RBP16.23■□□□□ 0.19
PCM1-218ENST00000523055 INTS13Q9NVM9 706 aa16.23■□□□□ 0.19
PCM1-218ENST00000523055 RAB23Q9ULC3 237 aa16.23■□□□□ 0.19
PCM1-218ENST00000523055 INSL5Q9Y5Q6 135 aa16.23■□□□□ 0.19
PCM1-218ENST00000523055 ARHGEF37A1IGU5 675 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 KPNA7A9QM74 516 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 CYP11A1P05108 521 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 KRT19P08727 400 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 TMEM191BP0C7N4 346 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 ELF1P32519 619 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 SATB1Q01826 763 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 UVSSAQ2YD98 709 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 SV2CQ496J9 727 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 WSCD1Q658N2 575 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 TPGS2Q68CL5 300 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 TCEAL8Q8IYN2 117 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 FMR1NBQ8N0W7 255 aaPredicted RBP16.22■□□□□ 0.19
PCM1-218ENST00000523055 CSGALNACT2Q8N6G5 542 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 XXYLT1Q8NBI6 393 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 ELSPBP1Q96BH3 223 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 ZNF560Q96MR9 790 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 KCTD10Q9H3F6 313 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 GDE1Q9NZC3 331 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 AFF4Q9UHB7 1163 aaKnown RBP16.22■□□□□ 0.19
PCM1-218ENST00000523055 MAPK8IP1Q9UQF2 711 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 LAMA1P25391 3075 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 PKD1L2Q7Z442 2459 aa16.22■□□□□ 0.19
PCM1-218ENST00000523055 GREB1Q4ZG55 1949 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 MYL1P05976 194 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 RHOP08100 348 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 DLATP10515 647 aaKnown RBP16.21■□□□□ 0.19
PCM1-218ENST00000523055 CEBPBP17676 345 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 HOXC13P31276 330 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 CASP4P49662 377 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 CYP24A1Q07973 514 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 BFSP1Q12934 665 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 PNOCQ13519 176 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 SIM2Q14190 667 aaPredicted RBP16.21■□□□□ 0.19
PCM1-218ENST00000523055 GRM2Q14416 872 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 C12orf56Q8IXR9 622 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 PLEKHO2Q8TD55 490 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 CACTINQ8WUQ7 758 aaKnown RBP16.21■□□□□ 0.19
PCM1-218ENST00000523055 ERCC4Q92889 916 aaPredicted RBP16.21■□□□□ 0.19
PCM1-218ENST00000523055 CCDC127Q96BQ5 260 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 LMAN1LQ9HAT1 526 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 RXFP3Q9NSD7 469 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 ITGA11Q9UKX5 1188 aa16.21■□□□□ 0.19
PCM1-218ENST00000523055 MRPS23Q9Y3D9 190 aaKnown RBP16.21■□□□□ 0.19
PCM1-218ENST00000523055 ZNF638Q14966 1978 aaKnown RBP16.21■□□□□ 0.19
PCM1-218ENST00000523055 MTMR11A4FU01 709 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 OR6C75A6NL08 312 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 HCRTO43612 131 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 SOAT2O75908 522 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 RHOBTB3O94955 611 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 LRG1P02750 347 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 CHRNB1P11230 501 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 CCR3P51677 355 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 TWF1Q12792 350 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 PSMD2Q13200 908 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 WDR44Q5JSH3 913 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 WDR49Q8IV35 697 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 ATAD1Q8NBU5 361 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 ENGASEQ8NFI3 743 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 ANKRD36BP1Q96IX9 119 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 IER2Q9BTL4 223 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 AVENQ9NQS1 362 aaPredicted RBP16.2■□□□□ 0.18
PCM1-218ENST00000523055 CEP72Q9P209 647 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 L1RE1Q9UN81 338 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 YIPF1Q9Y548 306 aa16.2■□□□□ 0.18
PCM1-218ENST00000523055 NCANO14594 1321 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 CHURC1-FNTBB4DL54 471 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 K7ESF4 209 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 MAN2B1O00754 1011 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 EXOC3O60645 756 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 FNTBP49356 437 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 LIMK1P53667 647 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 SNRPFP62306 86 aaKnown RBP16.19■□□□□ 0.18
PCM1-218ENST00000523055 DUSP4Q13115 394 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 GPR17Q13304 367 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 PSMD6Q15008 389 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 CCDC142Q17RM4 750 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 PRSS36Q5K4E3 855 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 LRRTM3Q86VH5 581 aa16.19■□□□□ 0.18
PCM1-218ENST00000523055 SMYD4Q8IYR2 804 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms