RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 FAM171BQ6P995 826 aa27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 WDR59Q6PJI9 974 aa27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 MYCBPAPQ8TBZ2 947 aa27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 LMAN2LQ9H0V9 348 aa27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 NGRNQ9NPE2 291 aaKnown RBP27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 CRTAC1Q9NQ79 661 aa27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 FNIP2Q9P278 1114 aa27.29■■□□□ 1.96
NKX2-1-204ENST00000522719 PTPRDP23468 1912 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 C2CD2LO14523 706 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 GRM6O15303 877 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 MED7O43513 233 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 PSMC1P62191 440 aaKnown RBP27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 SMARCB1Q12824 385 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 HGSNATQ68CP4 663 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 ARHGAP17Q68EM7 881 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 SLC8B1Q6J4K2 584 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 ZNF606Q8WXB4 792 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 ARNTL2Q8WYA1 636 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 PKMYT1Q99640 499 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 TCF25Q9BQ70 676 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 HAUS4Q9H6D7 363 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 CERS4Q9HA82 394 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 RXFP1Q9HBX9 757 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 ACP6Q9NPH0 428 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 ENTPD7Q9NQZ7 604 aa27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 NOCTQ9UK39 431 aaKnown RBP27.28■■□□□ 1.96
NKX2-1-204ENST00000522719 TRIOBPQ9H2D6 2365 aa27.27■■□□□ 1.96
NKX2-1-204ENST00000522719 THAP12O43422 761 aa27.27■■□□□ 1.96
NKX2-1-204ENST00000522719 ATP2C2O75185 946 aa27.27■■□□□ 1.96
NKX2-1-204ENST00000522719 PTMAP06454 111 aaKnown RBP27.27■■□□□ 1.96
NKX2-1-204ENST00000522719 FECHP22830 423 aa27.27■■□□□ 1.96
NKX2-1-204ENST00000522719 ERVFC1P60507 584 aa27.27■■□□□ 1.96
NKX2-1-204ENST00000522719 SMC1AQ14683 1233 aaKnown RBP27.27■■□□□ 1.96
NKX2-1-204ENST00000522719 NOP9Q86U38 636 aaKnown RBP27.27■■□□□ 1.96
NKX2-1-204ENST00000522719 TFAP2BQ92481 460 aa27.27■■□□□ 1.96
NKX2-1-204ENST00000522719 CDY1Q9Y6F8 540 aa27.27■■□□□ 1.96
NKX2-1-204ENST00000522719 TMEM265A0A087WTH1 108 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 MYBPHLA2RUH7 354 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 FSCN2O14926 492 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 CXCL14O95715 111 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 SKILP12757 684 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 DNAJB1P25685 340 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 CNGA2Q16280 664 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 NFE2Q16621 373 aaPredicted RBP27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 TDRD12Q587J7 1177 aaKnown RBP27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 MDH1BQ5I0G3 518 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 C12orf29Q8N999 325 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 DDX1Q92499 740 aaKnown RBP27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 CYFIP2Q96F07 1278 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 TMEM209Q96SK2 561 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 CLSTN3Q9BQT9 956 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 GTF3C4Q9UKN8 822 aa27.26■■□□□ 1.95
NKX2-1-204ENST00000522719 BRD2P25440 801 aaKnown RBP27.25■■□□□ 1.95
NKX2-1-204ENST00000522719 CDR2Q01850 454 aa27.25■■□□□ 1.95
NKX2-1-204ENST00000522719 GPR17Q13304 367 aa27.25■■□□□ 1.95
NKX2-1-204ENST00000522719 CAMK1Q14012 370 aa27.25■■□□□ 1.95
NKX2-1-204ENST00000522719 RSPO2Q6UXX9 243 aaPredicted RBP27.25■■□□□ 1.95
NKX2-1-204ENST00000522719 LRRTM3Q86VH5 581 aa27.25■■□□□ 1.95
NKX2-1-204ENST00000522719 GPIHBP1Q8IV16 184 aa27.25■■□□□ 1.95
NKX2-1-204ENST00000522719 HNRNPABQ99729 332 aaKnown RBP27.25■■□□□ 1.95
NKX2-1-204ENST00000522719 FAM49BQ9NUQ9 324 aa27.25■■□□□ 1.95
NKX2-1-204ENST00000522719 ARHGAP20Q9P2F6 1191 aa27.25■■□□□ 1.95
NKX2-1-204ENST00000522719 SSU72P8A0A1W2PR75 194 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 O00370 1275 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 LPXNO60711 386 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 CPB1P15086 417 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 ANXA13P27216 316 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 OR1D2P34982 312 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 NDUFV1P49821 464 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 MAPK8IP2Q13387 824 aaPredicted RBP27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 SLC39A12Q504Y0 691 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 PPP1R26Q5T8A7 1209 aaPredicted RBP27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 LCLAT1Q6UWP7 414 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 CYP26C1Q6V0L0 522 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 C4orf50Q6ZRC1 276 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 VPS36Q86VN1 386 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 TMTC1Q8IUR5 882 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 LRRC8AQ8IWT6 810 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 MRPL43Q8N983 215 aaKnown RBP27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 AUTS2Q8WXX7 1259 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 PCED1BQ96HM7 432 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 BAG1Q99933 345 aaPredicted RBP27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 AGPAT1Q99943 283 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 ZSWIM1Q9BR11 485 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 SYT11Q9BT88 431 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 ZNF576Q9H609 170 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 PCDHGC3Q9UN70 934 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 COL4A4P53420 1690 aaPredicted RBP27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 CALCAP01258 141 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 CCDC112Q8NEF3 446 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 MICAL1Q8TDZ2 1067 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 C2orf15Q8WU43 125 aaKnown RBP27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 SLC20A1Q8WUM9 679 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 LPIN3Q9BQK8 851 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 EMILIN2Q9BXX0 1053 aa27.24■■□□□ 1.95
NKX2-1-204ENST00000522719 ATP8B3O60423 1300 aa27.23■■□□□ 1.95
NKX2-1-204ENST00000522719 ATG2AQ2TAZ0 1938 aa27.23■■□□□ 1.95
NKX2-1-204ENST00000522719 CHD9Q3L8U1 2897 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms