RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 GTPBP4Q9BZE4 634 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-209ENST00000521167 GPR88Q9GZN0 384 aa11.17□□□□□ -0.62
TRAPPC9-209ENST00000521167 CRISPLD1Q9H336 500 aa11.17□□□□□ -0.62
TRAPPC9-209ENST00000521167 ASAH2Q9NR71 780 aa11.17□□□□□ -0.62
TRAPPC9-209ENST00000521167 HOOK1Q9UJC3 728 aaKnown RBP11.17□□□□□ -0.62
TRAPPC9-209ENST00000521167 SLC27A5Q9Y2P5 690 aa11.17□□□□□ -0.62
TRAPPC9-209ENST00000521167 PCDHB5Q9Y5E4 795 aa11.17□□□□□ -0.62
TRAPPC9-209ENST00000521167 MYH10P35580 1976 aa11.17□□□□□ -0.62
TRAPPC9-209ENST00000521167 PTPRDP23468 1912 aa11.17□□□□□ -0.62
TRAPPC9-209ENST00000521167 GREB1Q4ZG55 1949 aa11.17□□□□□ -0.62
TRAPPC9-209ENST00000521167 STAU1O95793 577 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 CST3P01034 146 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 HAPLN1P10915 354 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 RPL13P26373 211 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 PCSK1P29120 753 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 ATICP31939 592 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 PTPN5P54829 565 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 TRPC3Q13507 836 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 SOWAHAQ2M3V2 549 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 SCARA3Q6AZY7 606 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 PARM1Q6UWI2 310 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 DNAJB7Q7Z6W7 309 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 FGF14Q92915 247 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 MCRS1Q96EZ8 462 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 FAM84AQ96KN4 292 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 GSDMAQ96QA5 445 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 PRRX2Q99811 253 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 LRRC3Q9BY71 257 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 GZF1Q9H116 711 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 DNAJC25Q9H1X3 360 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 SMOC2Q9H3U7 446 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 SLC2A4RGQ9NR83 387 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 RMND1Q9NWS8 449 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 DDX43Q9NXZ2 648 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 FRMD4BQ9Y2L6 1034 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 NUMBLQ9Y6R0 609 aa11.16□□□□□ -0.62
TRAPPC9-209ENST00000521167 NUP210Q8TEM1 1887 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 IKBKBO14920 756 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 NARSO43776 548 aaKnown RBP11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 TACC1O75410 805 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 MOSPD3O75425 235 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 ECI2O75521 394 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 SMC2O95347 1197 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 MYL4P12829 197 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 CEBPBP17676 345 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 WARSP23381 471 aaKnown RBP11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 CCR2P41597 374 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 CLCN5P51795 746 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 ENPEPQ07075 957 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 PNOCQ13519 176 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 VEPH1Q14D04 833 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 COBLL1Q53SF7 1204 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 INTS6LQ5JSJ4 861 aaKnown RBP11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 OSTM1Q86WC4 334 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 ADGRF2Q8IZF7 708 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 PLEKHO2Q8TD55 490 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 KCNV2Q8TDN2 545 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 ING5Q8WYH8 240 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 PSMG2Q969U7 264 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 SYAP1Q96A49 352 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 ELSPBP1Q96BH3 223 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 TCEAL4Q96EI5 215 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 VRTNQ9H8Y1 702 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 ABCB6Q9NP58 842 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 RAPGEFL1Q9UHV5 662 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 FBXL21Q9UKT6 434 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 ANAPC1Q9H1A4 1944 aa11.15□□□□□ -0.62
TRAPPC9-209ENST00000521167 MIA3Q5JRA6 1907 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 LRRIQ3A6PVS8 624 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 PHACTR2O75167 634 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 C4BPAP04003 597 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 AVPR2P30518 371 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 GNL1P36915 607 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 CASP4P49662 377 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 MCCD1P59942 119 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 RPL10AP62906 217 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 PLCB2Q00722 1185 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 ADAM9Q13443 819 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 MAPRE1Q15691 268 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 TAF12Q16514 161 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 EDRF1Q3B7T1 1238 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 WDR72Q3MJ13 1102 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 MGAT5BQ3V5L5 792 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 ZNF658Q5TYW1 1059 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 FAM171BQ6P995 826 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 INTS8Q75QN2 995 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 TMC8Q8IU68 726 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 ANKK1Q8NFD2 765 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 SPATA20Q8TB22 786 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 SHKBP1Q8TBC3 707 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 FAM200AQ8TCP9 573 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 KBTBD7Q8WVZ9 684 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 SMARCD2Q92925 531 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 E2F7Q96AV8 911 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 FUBP3Q96I24 572 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 MMS19Q96T76 1030 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 PKMYT1Q99640 499 aa11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 SEPT5Q99719 369 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 RPP25Q9BUL9 199 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-209ENST00000521167 MFSD1Q9H3U5 465 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms