RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 MED7O43513 233 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 CLSTN1O94985 981 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 GLUD1P00367 558 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 TPM1P09493 284 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 HNRNPA1P09651 372 aaKnown RBP eCLIP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 WEE2P0C1S8 567 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 FERP16591 822 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 HOXB8P17481 243 aaPredicted RBP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 PTPN1P18031 435 aaKnown RBP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 LMO2P25791 158 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 KLRC2P26717 231 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 HNRNPH3P31942 346 aaKnown RBP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 OR1D2P34982 312 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 IRS1P35568 1242 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 SOX5P35711 763 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 STAT1P42224 750 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 MRE11P49959 708 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 NDST1P52848 882 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 POLR2FP61218 127 aaKnown RBP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 ZBED6P86452 979 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 ROR1Q01973 937 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 PTK2Q05397 1052 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 LRMPQ12912 555 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 DRAP1Q14919 205 aaPredicted RBP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 CNGA2Q16280 664 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 CTC1Q2NKJ3 1217 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 SGO2Q562F6 1265 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 PLPP4Q5VZY2 271 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 IQCEQ6IPM2 695 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 PPP1R2P3Q6NXS1 205 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 TMEM270Q6UE05 265 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 RSPO2Q6UXX9 243 aaPredicted RBP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 RRAGAQ7L523 313 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 CACNA2D4Q7Z3S7 1137 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 TMEM130Q8N3G9 435 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 SLC4A11Q8NBS3 891 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 ZNF397Q8NF99 534 aaPredicted RBP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 PCMTD1Q96MG8 357 aaPredicted RBP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 SPAG5Q96R06 1193 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 CDX2Q99626 313 aaPredicted RBP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 ARID3AQ99856 593 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 GPR88Q9GZN0 384 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 ELOVL4Q9GZR5 314 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 PRDM12Q9H4Q4 367 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 TLE6Q9H808 572 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 CERS4Q9HA82 394 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 CSNK1G1Q9HCP0 422 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 CRTAC1Q9NQ79 661 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 FAM207AQ9NSI2 230 aaPredicted RBP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 COMMD8Q9NX08 183 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 MTMR10Q9NXD2 777 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 ZDHHC7Q9NXF8 308 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 EHD2Q9NZN4 543 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 AIPL1Q9NZN9 384 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 CAPN11Q9UMQ6 739 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 PCDHGC3Q9UN70 934 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 ASB3Q9Y575 518 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 NME7Q9Y5B8 376 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 PCDHB5Q9Y5E4 795 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 PCDHB4Q9Y5E5 795 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 TIMM13Q9Y5L4 95 aaPredicted RBP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 FHOD1Q9Y613 1164 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 BZW2Q9Y6E2 419 aaKnown RBP6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 MYBPHLA2RUH7 354 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 MTMR11A4FU01 709 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 SOBPA7XYQ1 873 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 RFXAPO00287 272 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 FOXN3O00409 490 aaPredicted RBP6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 C2CD2LO14523 706 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 TRIM66O15016 1216 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 TGM5O43548 720 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 GFPT2O94808 682 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 SETSIPP0DME0 302 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 HAPLN1P10915 354 aaPredicted RBP6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 CPB1P15086 417 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 CD58P19256 250 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 ANXA13P27216 316 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 ELF1P32519 619 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 CLCN1P35523 988 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 PRKCIP41743 596 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 RAP1GAPP47736 663 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 RPL34P49207 117 aaKnown RBP6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 ZNF75DP51815 510 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 CDH8P55286 799 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 SLC8A3P57103 927 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 RPL10AP62906 217 aaKnown RBP6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 CDK17Q00537 523 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 TBX2Q13207 712 aaPredicted RBP6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 ADAM15Q13444 863 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 ADGRE1Q14246 886 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 LCLAT1Q6UWP7 414 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 SCARA5Q6ZMJ2 495 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 LRRTM3Q86VH5 581 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 SPATA2LQ8IUW3 424 aaPredicted RBP6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 CNGA4Q8IV77 575 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 FUKQ8N0W3 1084 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 SCML4Q8N228 414 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 MICALL1Q8N3F8 863 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 DEFB123Q8N688 67 aa6.76□□□□□ -1.33
IGHV4-55-201ENST00000520889 ANKRD52Q8NB46 1076 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms