RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 KYNUQ16719 465 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 LONRF1Q17RB8 773 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 FAXDC2Q96IV6 333 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 SELENOSQ9BQE4 189 aa27.16■■□□□ 1.94
COL13A1-213ENST00000520267 TUT1Q9H6E5 874 aaKnown RBP27.16■■□□□ 1.94
COL13A1-213ENST00000520267 DDX56Q9NY93 547 aaKnown RBP27.16■■□□□ 1.94
COL13A1-213ENST00000520267 LRRD1A4D1F6 860 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 TTC4O95801 387 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 COPS2P61201 443 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 ARFGAP1Q8N6T3 406 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 TMEM176AQ96HP8 235 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 ROPN1BQ9BZX4 212 aaPredicted RBP27.15■■□□□ 1.94
COL13A1-213ENST00000520267 TSPYL1Q9H0U9 437 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 ROPN1Q9HAT0 212 aaPredicted RBP27.15■■□□□ 1.94
COL13A1-213ENST00000520267 CCL15-CCL14A0A0B4J2E2 113 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 TSPAN1O60635 241 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 ERBB2P04626 1255 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 CHN1P15882 459 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 ATICP31939 592 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 CDKN2BP42772 138 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 CCL15Q16663 113 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 TFDP3Q5H9I0 405 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 BBOF1Q8ND07 529 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 AGAP1Q9UPQ3 857 aa27.15■■□□□ 1.94
COL13A1-213ENST00000520267 MICAL2O94851 1124 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 CETPP11597 493 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 PTPN7P35236 360 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 TMEM132DQ14C87 1099 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 P3H1Q32P28 736 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 MARCH8Q5T0T0 291 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 XYLT1Q86Y38 959 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 KIAA0319LQ8IZA0 1049 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 HAUS1Q96CS2 278 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 HPDLQ96IR7 371 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 VRTNQ9H8Y1 702 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 NINJ2Q9NZG7 142 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 ZNF148Q9UQR1 794 aa27.14■■□□□ 1.94
COL13A1-213ENST00000520267 ZSCAN5DPP0CG00 497 aa27.14■■□□□ 1.93
COL13A1-213ENST00000520267 CDR1P51861 262 aa27.14■■□□□ 1.93
COL13A1-213ENST00000520267 LMNB2Q03252 620 aa27.14■■□□□ 1.93
COL13A1-213ENST00000520267 MFSD5Q6N075 450 aa27.14■■□□□ 1.93
COL13A1-213ENST00000520267 HIBCHQ6NVY1 386 aaPredicted RBP27.14■■□□□ 1.93
COL13A1-213ENST00000520267 DRICH1Q6PGQ1 229 aaPredicted RBP27.14■■□□□ 1.93
COL13A1-213ENST00000520267 ZNF467Q7Z7K2 595 aaPredicted RBP27.14■■□□□ 1.93
COL13A1-213ENST00000520267 EMC1Q8N766 993 aa27.14■■□□□ 1.93
COL13A1-213ENST00000520267 BRI3BPQ8WY22 251 aa27.14■■□□□ 1.93
COL13A1-213ENST00000520267 XPO6Q96QU8 1125 aaKnown RBP27.14■■□□□ 1.93
COL13A1-213ENST00000520267 METTL5Q9NRN9 209 aaKnown RBP27.14■■□□□ 1.93
COL13A1-213ENST00000520267 CITO14578 2027 aa27.14■■□□□ 1.93
COL13A1-213ENST00000520267 KAT6AQ92794 2004 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 GLTPD2A6NH11 291 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 C3orf70A6NLC5 250 aaPredicted RBP27.13■■□□□ 1.93
COL13A1-213ENST00000520267 STRNO43815 780 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 LRCH4O75427 683 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 SMPD1P17405 629 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 IRX5P78411 483 aaPredicted RBP27.13■■□□□ 1.93
COL13A1-213ENST00000520267 SLC25A11Q02978 314 aaKnown RBP27.13■■□□□ 1.93
COL13A1-213ENST00000520267 GRIK4Q16099 956 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 QPCTQ16769 361 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 ERMARDQ5T6L9 678 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 CENPTQ96BT3 561 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 ZWILCHQ9H900 591 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 CYP3A43Q9HB55 503 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 ETS1P14921 441 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 IL1R2P27930 398 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 CCDC38Q502W7 563 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 SYNCQ9H7C4 482 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 MORF4L1Q9UBU8 362 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.13■■□□□ 1.93
COL13A1-213ENST00000520267 SLC45A1Q9Y2W3 748 aa27.13■■□□□ 1.93
COL13A1-213ENST00000520267 SMTNL2Q2TAL5 461 aa27.12■■□□□ 1.93
COL13A1-213ENST00000520267 MAP1SQ66K74 1059 aaPredicted RBP27.12■■□□□ 1.93
COL13A1-213ENST00000520267 ALLCQ8N6M5 410 aa27.12■■□□□ 1.93
COL13A1-213ENST00000520267 SCN4AP35499 1836 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 CHADLQ6NUI6 762 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 POLNQ7Z5Q5 900 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 GPR142Q7Z601 462 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 DPP9Q86TI2 863 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 IPO4Q8TEX9 1081 aaKnown RBP27.11■■□□□ 1.93
COL13A1-213ENST00000520267 ACAP3Q96P50 834 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 STMN4Q9H169 189 aaPredicted RBP27.11■■□□□ 1.93
COL13A1-213ENST00000520267 CLEC11AQ9Y240 323 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 TRIP11Q15643 1979 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 A0A1B0GUA9 196 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 M0QYV0 167 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 MMP3P08254 477 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 GSCP56915 257 aaPredicted RBP27.11■■□□□ 1.93
COL13A1-213ENST00000520267 ZNF268Q14587 947 aaPredicted RBP27.11■■□□□ 1.93
COL13A1-213ENST00000520267 KYAT1Q16773 422 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 KCNT1Q5JUK3 1230 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 HEXIM2Q96MH2 286 aaKnown RBP27.11■■□□□ 1.93
COL13A1-213ENST00000520267 DPP3Q9NY33 737 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 WDR35Q9P2L0 1181 aa27.11■■□□□ 1.93
COL13A1-213ENST00000520267 DRG1Q9Y295 367 aaKnown RBP27.11■■□□□ 1.93
COL13A1-213ENST00000520267 P4HA1P13674 534 aa27.1■■□□□ 1.93
COL13A1-213ENST00000520267 PSMC4P43686 418 aa27.1■■□□□ 1.93
COL13A1-213ENST00000520267 GTF2A2P52657 109 aa27.1■■□□□ 1.93
COL13A1-213ENST00000520267 OASLQ15646 514 aaKnown RBP27.1■■□□□ 1.93
COL13A1-213ENST00000520267 EXOC3L1Q86VI1 746 aa27.1■■□□□ 1.93
COL13A1-213ENST00000520267 FNIP1Q8TF40 1166 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms