RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SLC5A9Q2M3M2 681 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 MGAT5BQ3V5L5 792 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 NAIF1Q69YI7 327 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 MRNIPQ6NTE8 343 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 LVRNQ6Q4G3 990 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 GATAD2AQ86YP4 633 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 RHOT2Q8IXI1 618 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 ELOA2Q8IYF1 753 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 ANKRD35Q8N283 1001 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 STT3BQ8TCJ2 826 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 MIEF2Q96C03 454 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 SLC46A1Q96NT5 459 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 OR14A2Q96R54 314 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 MED15Q96RN5 788 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 PNKPQ96T60 521 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 KATNAL1Q9BW62 490 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 SORBS1Q9BX66 1292 aaKnown RBP6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 TLR10Q9BXR5 811 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 SH3BP1Q9Y3L3 701 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 NEU2Q9Y3R4 380 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 TRIM38O00635 465 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 DCLK1O15075 740 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 NCAM2O15394 837 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 PRSS23O95084 383 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 LRPAP1P30533 357 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 SLC5A2P31639 672 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 MAPK9P45984 424 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 TOB1P50616 345 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 LOXL3P58215 753 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 PKN1Q16512 942 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 TRIM71Q2Q1W2 868 aaKnown RBP6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 AGAP9Q5VTM2 703 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 TAPT1Q6NXT6 567 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 MZT2AQ6P582 158 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 HTR3DQ70Z44 454 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 PSD4Q8NDX1 1056 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 POC1BQ8TC44 478 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 STYXQ8WUJ0 223 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 TRIB1Q96RU8 372 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 NELL2Q99435 816 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 PCDHAC1Q9H158 963 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 ZBTB26Q9HCK0 441 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 MRPS18AQ9NVS2 196 aaKnown RBP6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 PDP2Q9P2J9 529 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 CDYLQ9Y232 598 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 ATP11BQ9Y2G3 1177 aa6.23□□□□□ -1.41
HMGB1P46-201ENST00000520062 CCDC195A0A1B0GUA6 201 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 A0A1B0GVC2 190 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 DIRC3C9JPN6 131 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 E7ENX8 843 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 H7C4K7 107 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 PIP5K1BO14986 540 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 ITGA2BP08514 1039 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 NPPBP16860 134 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 DDIT3P35638 169 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 PTDSS1P48651 473 aaKnown RBP6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 TAP2Q03519 686 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 NSUN2Q08J23 767 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 FOXL1Q12952 345 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 MAPRE1Q15691 268 aaKnown RBP6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 LIN54Q6MZP7 749 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 JMJD6Q6NYC1 403 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 CRTC1Q6UUV9 634 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 USP49Q70CQ1 688 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 SYT12Q8IV01 421 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 CCDC28AQ8IWP9 274 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 D2HGDHQ8N465 521 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 USP13Q92995 863 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 UBXN10Q96LJ8 280 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 ZSCAN31Q96LW9 406 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 RNPEPQ9H4A4 650 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 ITM2CQ9NQX7 267 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 RRN3Q9NYV6 651 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 DNMT3BQ9UBC3 853 aaKnown RBP6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 ZMYND8Q9ULU4 1186 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 RAD54BQ9Y620 910 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 CDY1Q9Y6F8 540 aa6.22□□□□□ -1.41
HMGB1P46-201ENST00000520062 IPO5O00410 1097 aaKnown RBP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 RRP9O43818 475 aaKnown RBP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 VPS4BO75351 444 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 MSX2P35548 267 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 GCLCP48506 637 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 TBX2Q13207 712 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 BOP1Q14137 746 aaKnown RBP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 ZNF750Q32MQ0 723 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 ZNF648Q5T619 568 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 FAM102AQ5T9C2 384 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 FAXCQ5TGI0 409 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 JAKMIP3Q5VZ66 844 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 METRNLQ641Q3 311 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 OGFOD2Q6N063 350 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 TAF2Q6P1X5 1199 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 LAYNQ6UX15 382 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 POLNQ7Z5Q5 900 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 MB21D1Q8N884 522 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 SPPL3Q8TCT6 385 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 OTUD7AQ8TE49 926 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 RSC1A1Q92681 617 aa6.21□□□□□ -1.42
HMGB1P46-201ENST00000520062 MARS2Q96GW9 593 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms