RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 EPS15L1Q9UBC2 864 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 DDX20Q9UHI6 824 aaKnown RBP12.24□□□□□ -0.45
SYNPO-204ENST00000519664 HAO1Q9UJM8 370 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 NAALADL1Q9UQQ1 740 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 ANGPTL3Q9Y5C1 460 aa12.24□□□□□ -0.45
SYNPO-204ENST00000519664 A0A087WZ62 844 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 UBOX5O94941 541 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 ADRB2P07550 413 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 KIF19Q2TAC6 998 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 RASSF3Q86WH2 238 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 ETNPPLQ8TBG4 499 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 TNIP3Q96KP6 325 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 SERPINB12Q96P63 405 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 FDXACB1Q9BRP7 624 aaPredicted RBP12.23□□□□□ -0.45
SYNPO-204ENST00000519664 CEP41Q9BYV8 373 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 Q9H521 79 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 RSAD1Q9HA92 442 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 ANLNQ9NQW6 1124 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 ADA2Q9NZK5 511 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 HBP1O60381 514 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 GPD1P21695 349 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 SSTR1P30872 391 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 TPI1P60174 286 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 NSUN2Q08J23 767 aaKnown RBP eCLIP12.23□□□□□ -0.45
SYNPO-204ENST00000519664 CLEC16AQ2KHT3 1053 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 CCDC60Q8IWA6 550 aaPredicted RBP12.23□□□□□ -0.45
SYNPO-204ENST00000519664 APPL2Q8NEU8 664 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 CDC26Q8NHZ8 85 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 MKL1Q969V6 931 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 LRFN2Q9ULH4 789 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 B2RBV5 119 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 F8VP50 259 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 H3BRJ5 948 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 CYP2C9P11712 490 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 NAMPTP43490 491 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 SCTRP47872 440 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 CENPCQ03188 943 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 STX3Q13277 289 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 TMEM259Q4ZIN3 620 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 TFDP3Q5H9I0 405 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 FASTKD5Q7L8L6 764 aaKnown RBP12.23□□□□□ -0.45
SYNPO-204ENST00000519664 RAB44Q7Z6P3 723 aaPredicted RBP12.23□□□□□ -0.45
SYNPO-204ENST00000519664 C2orf69Q8N8R5 385 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 AFG1LQ8WV93 481 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 ALG3Q92685 438 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 APOL2Q9BQE5 337 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 TRIM56Q9BRZ2 755 aaKnown RBP12.23□□□□□ -0.45
SYNPO-204ENST00000519664 KIF9Q9HAQ2 790 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 GDF3Q9NR23 364 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 PRMT7Q9NVM4 692 aaPredicted RBP12.23□□□□□ -0.45
SYNPO-204ENST00000519664 ANGPTL2Q9UKU9 493 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 RGPD8O14715 1765 aaPredicted RBP12.23□□□□□ -0.45
SYNPO-204ENST00000519664 SNUPNO95149 360 aaKnown RBP12.23□□□□□ -0.45
SYNPO-204ENST00000519664 HMBSP08397 361 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 CUL3Q13618 768 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 FAM131BQ86XD5 332 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 ABRAQ8N0Z2 381 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 TMC2Q8TDI7 906 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 MIEF2Q96C03 454 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 PHTF1Q9UMS5 762 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 MON2Q7Z3U7 1717 aa12.23□□□□□ -0.45
SYNPO-204ENST00000519664 SNRPFP62306 86 aaKnown RBP12.22□□□□□ -0.45
SYNPO-204ENST00000519664 PPIL6Q8IXY8 311 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 SLC7A14Q8TBB6 771 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 ALKBH8Q96BT7 664 aaKnown RBP12.22□□□□□ -0.45
SYNPO-204ENST00000519664 SGF29Q96ES7 293 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 A1CFQ9NQ94 594 aaKnown RBP12.22□□□□□ -0.45
SYNPO-204ENST00000519664 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.22□□□□□ -0.45
SYNPO-204ENST00000519664 DNPEPQ9ULA0 475 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 RIPK2O43353 540 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 DNAJC8O75937 253 aaPredicted RBP12.22□□□□□ -0.45
SYNPO-204ENST00000519664 KRT80Q6KB66 452 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 XRRA1Q6P2D8 792 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 PALB2Q86YC2 1186 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 CHST13Q8NET6 341 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 ZBTB10Q96DT7 871 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 INPP4AQ96PE3 977 aaPredicted RBP12.22□□□□□ -0.45
SYNPO-204ENST00000519664 RPS6KA5O75582 802 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 PAX7P23759 505 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 FLT3P36888 993 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 PRAMEP78395 509 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 LRRC6Q86X45 466 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 RDM1Q8NG50 284 aa12.22□□□□□ -0.45
SYNPO-204ENST00000519664 UBA6A0AVT1 1052 aaPredicted RBP12.21□□□□□ -0.45
SYNPO-204ENST00000519664 ZWINTO95229 277 aa12.21□□□□□ -0.45
SYNPO-204ENST00000519664 GH1P01241 217 aa12.21□□□□□ -0.45
SYNPO-204ENST00000519664 AARSP49588 968 aaKnown RBP eCLIP12.21□□□□□ -0.45
SYNPO-204ENST00000519664 DEUP1Q05D60 604 aa12.21□□□□□ -0.45
SYNPO-204ENST00000519664 BMPR2Q13873 1038 aa12.21□□□□□ -0.45
SYNPO-204ENST00000519664 PCSK7Q16549 785 aa12.21□□□□□ -0.45
SYNPO-204ENST00000519664 TMTC4Q5T4D3 741 aa12.21□□□□□ -0.45
SYNPO-204ENST00000519664 HGSNATQ68CP4 663 aa12.21□□□□□ -0.45
SYNPO-204ENST00000519664 KLC3Q6P597 504 aa12.21□□□□□ -0.45
SYNPO-204ENST00000519664 KCNV1Q6PIU1 500 aa12.21□□□□□ -0.45
SYNPO-204ENST00000519664 APTXQ7Z2E3 356 aaKnown RBP12.21□□□□□ -0.45
SYNPO-204ENST00000519664 PIK3R5Q8WYR1 880 aa12.21□□□□□ -0.45
SYNPO-204ENST00000519664 MANSC1Q9H8J5 431 aa12.21□□□□□ -0.45
SYNPO-204ENST00000519664 NOD2Q9HC29 1040 aa12.21□□□□□ -0.45
SYNPO-204ENST00000519664 POLIQ9UNA4 740 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms