RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ABHD14A-ACY1A0A1B0GW23 586 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 TARSL2A2RTX5 802 aaKnown RBP15.36■□□□□ 0.05
CLN8-204ENST00000519254 CCDC151A5D8V7 595 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 SPTLC1O15269 473 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 INPPL1O15357 1258 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 CEP104O60308 925 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 ZRANB2O95218 330 aaKnown RBP eCLIP15.36■□□□□ 0.05
CLN8-204ENST00000519254 STAU1O95793 577 aaKnown RBP15.36■□□□□ 0.05
CLN8-204ENST00000519254 MYBL1P10243 752 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 IGFBP6P24592 240 aaPredicted RBP15.36■□□□□ 0.05
CLN8-204ENST00000519254 BRD2P25440 801 aaKnown RBP15.36■□□□□ 0.05
CLN8-204ENST00000519254 PNPLA4P41247 253 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 YWHAEP62258 255 aaKnown RBP15.36■□□□□ 0.05
CLN8-204ENST00000519254 FPGSQ05932 587 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 TUSC3Q13454 348 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 MESDQ14696 234 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 SV2CQ496J9 727 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 PAN2Q504Q3 1202 aaKnown RBP15.36■□□□□ 0.05
CLN8-204ENST00000519254 DCAF12L1Q5VU92 463 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 FAM117BQ6P1L5 589 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 WDR93Q6P2C0 686 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 FAM43BQ6ZT52 329 aaPredicted RBP15.36■□□□□ 0.05
CLN8-204ENST00000519254 OTOP2Q7RTS6 562 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 TMCO2Q7Z6W1 182 aaPredicted RBP15.36■□□□□ 0.05
CLN8-204ENST00000519254 ZNF280BQ86YH2 543 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 PHF13Q86YI8 300 aaPredicted RBP15.36■□□□□ 0.05
CLN8-204ENST00000519254 RASGEF1CQ8N431 466 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 TFAP2BQ92481 460 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 BTBD6Q96KE9 485 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 FAM193BQ96PV7 902 aaPredicted RBP15.36■□□□□ 0.05
CLN8-204ENST00000519254 SELENOOQ9BVL4 669 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 IL23AQ9NPF7 189 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 ZMYND8Q9ULU4 1186 aaPredicted RBP15.36■□□□□ 0.05
CLN8-204ENST00000519254 TBKBP1A7MCY6 615 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 TMEM110-MUSTN1A8MSY1 372 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 KPNA7A9QM74 516 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 HOXA2O43364 376 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 B4GALT3O60512 393 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 SEC31AO94979 1220 aaKnown RBP15.36■□□□□ 0.05
CLN8-204ENST00000519254 PFKMP08237 780 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 COMTP21964 271 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 RRM1P23921 792 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 LILRA4P59901 499 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 DEFB103AP81534 67 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 PTP4A2Q12974 167 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 C2CD6Q53TS8 623 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 LLGL2Q6P1M3 1020 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 TMCO3Q6UWJ1 677 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 CPNE8Q86YQ8 564 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 WHAMMQ8TF30 809 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 HASPINQ8TF76 798 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 ALG3Q92685 438 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 DPF3Q92784 378 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 TRIM11Q96F44 468 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 CASD1Q96PB1 797 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 LRRC1Q9BTT6 524 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 TMEM59LQ9UK28 342 aa15.36■□□□□ 0.05
CLN8-204ENST00000519254 TTC3P53804 2025 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 LTBP2Q14767 1821 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 ZBBXA8MT70 800 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 DDHD2O94830 711 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 AMHP03971 560 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 TUBBP07437 444 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 RPL9P32969 192 aaKnown RBP15.35■□□□□ 0.05
CLN8-204ENST00000519254 RAD23BP54727 409 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 ORC1Q13415 861 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 PPIGQ13427 754 aaKnown RBP eCLIP15.35■□□□□ 0.05
CLN8-204ENST00000519254 UPP1Q16831 310 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 PHLDB2Q86SQ0 1253 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 CRIPAKQ8N1N5 446 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 C3orf58Q8NDZ4 430 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 HNRNPLLQ8WVV9 542 aaKnown RBP15.35■□□□□ 0.05
CLN8-204ENST00000519254 CD101Q93033 1021 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 VCPIP1Q96JH7 1222 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.35■□□□□ 0.055e-8■■■■□ 21.4
CLN8-204ENST00000519254 KANSL3Q9P2N6 904 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 HCSTQ9UBK5 93 aa15.35■□□□□ 0.05
CLN8-204ENST00000519254 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.35■□□□□ 0.05
CLN8-204ENST00000519254 F8W810 466 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 B3GAT3O94766 335 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 LSM8O95777 96 aaKnown RBP15.34■□□□□ 0.05
CLN8-204ENST00000519254 OR1G1P47890 313 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 WDR5P61964 334 aaKnown RBP15.34■□□□□ 0.05
CLN8-204ENST00000519254 C1QBPQ07021 282 aaKnown RBP15.34■□□□□ 0.05
CLN8-204ENST00000519254 HDAC7Q8WUI4 952 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 KRT35Q92764 455 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 DDX27Q96GQ7 796 aaKnown RBP15.34■□□□□ 0.05
CLN8-204ENST00000519254 TWNKQ96RR1 684 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 C11orf70Q9BRQ4 267 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 TRIM7Q9C029 511 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 CYP3A43Q9HB55 503 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 ADAM22Q9P0K1 906 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 DNAJB4Q9UDY4 337 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 HMGXB4Q9UGU5 601 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 TTC7AQ9ULT0 858 aaPredicted RBP15.34■□□□□ 0.05
CLN8-204ENST00000519254 PCDHGC3Q9UN70 934 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 MIF4GDA9UHW6 222 aaKnown RBP15.34■□□□□ 0.05
CLN8-204ENST00000519254 I3L4J1 428 aa15.34■□□□□ 0.05
CLN8-204ENST00000519254 PGRMC1O00264 195 aaKnown RBP15.34■□□□□ 0.05
CLN8-204ENST00000519254 CILPO75339 1184 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms