RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 ESPNB1AK53 854 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 H7C4K7 107 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 STK25O00506 426 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 GYPCP04921 128 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 OR4Q2P0C623 313 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 ODC1P11926 461 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 SKILP12757 684 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 CPB1P15086 417 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 HOXB8P17481 243 aaPredicted RBP8.12□□□□□ -1.11
SDCBP-206ENST00000519115 PAX3P23760 479 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 MSNP26038 577 aaKnown RBP8.12□□□□□ -1.11
SDCBP-206ENST00000519115 PON1P27169 355 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 CASP14P31944 242 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 KRT9P35527 623 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 ROR1Q01973 937 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 YWHAHQ04917 246 aaPredicted RBP8.12□□□□□ -1.11
SDCBP-206ENST00000519115 RAB33AQ14088 237 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 CBX2Q14781 532 aaPredicted RBP8.12□□□□□ -1.11
SDCBP-206ENST00000519115 PUS10Q3MIT2 529 aaKnown RBP8.12□□□□□ -1.11
SDCBP-206ENST00000519115 SV2CQ496J9 727 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 KLHDC7AQ5VTJ3 777 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 WSCD1Q658N2 575 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 OVOS1Q6IE37 1185 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 DPY19L2P1Q6NXN4 242 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 CYP26C1Q6V0L0 522 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 C15orf39Q6ZRI6 1047 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 CREBRFQ8IUR6 639 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 WDR49Q8IV35 697 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 SPC24Q8NBT2 197 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 FBXL13Q8NEE6 735 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 APPL2Q8NEU8 664 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 CXorf38Q8TB03 319 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 KIAA1524Q8TCG1 905 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 SLC39A7Q92504 469 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 SUSD6Q92537 303 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 BAG1Q99933 345 aaPredicted RBP8.12□□□□□ -1.11
SDCBP-206ENST00000519115 ADAM7Q9H2U9 754 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 ITGA11Q9UKX5 1188 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 BACE2Q9Y5Z0 518 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 BDP1A6H8Y1 2624 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 ATP8B3O60423 1300 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 LRRIQ3A6PVS8 624 aaPredicted RBP8.11□□□□□ -1.11
SDCBP-206ENST00000519115 KPNA7A9QM74 516 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 KIF2AO00139 706 aaPredicted RBP8.11□□□□□ -1.11
SDCBP-206ENST00000519115 PES1O00541 588 aaKnown RBP8.11□□□□□ -1.11
SDCBP-206ENST00000519115 CYB561D2O14569 222 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 CCL16O15467 120 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 ZSCAN12O43309 604 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 TBC1D4O60343 1298 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 CLSTN1O94985 981 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 C8AP07357 584 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 FAM163BP0C2L3 166 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 TRIM49P0CI25 452 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 TRIM49CP0CI26 452 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 C7P10643 843 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 UCHL3P15374 230 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 TYMPP19971 482 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 SSTR3P32745 418 aaPredicted RBP8.11□□□□□ -1.11
SDCBP-206ENST00000519115 PNPLA4P41247 253 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 PRKCIP41743 596 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 DLG4P78352 724 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 RBP5P82980 135 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 GCNT1Q02742 428 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 ZP2Q05996 745 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 ITIH3Q06033 890 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 BIRC3Q13489 604 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 MRPL58Q14197 206 aaKnown RBP8.11□□□□□ -1.11
SDCBP-206ENST00000519115 DUOXA2Q1HG44 320 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 HSP90AA4PQ58FG1 418 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 C10orf76Q5T2E6 689 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 LIN9Q5TKA1 542 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 SLC8B1Q6J4K2 584 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 CES5AQ6NT32 575 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 LILRA6Q6PI73 481 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 ELMSAN1Q6PJG2 1045 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 TRAPPC11Q7Z392 1133 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 TTC39CQ8N584 583 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 LRRC52Q8N7C0 313 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 LMO3Q8TAP4 145 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 SLC7A14Q8TBB6 771 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 SMG7Q92540 1137 aaKnown RBP8.11□□□□□ -1.11
SDCBP-206ENST00000519115 ZNF516Q92618 1163 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 ELMO3Q96BJ8 720 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 ZNF707Q96C28 371 aaPredicted RBP8.11□□□□□ -1.11
SDCBP-206ENST00000519115 HPDLQ96IR7 371 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 PGLYRP2Q96PD5 576 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 TMEM209Q96SK2 561 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 STK33Q9BYT3 514 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 PLEKHA4Q9H4M7 779 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 POMKQ9H5K3 350 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 CD320Q9NPF0 282 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 ABHD10Q9NUJ1 306 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 SPTLC3Q9NUV7 552 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 APEX2Q9UBZ4 518 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 L1RE1Q9UN81 338 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 R3HCC1Q9Y3T6 440 aaKnown RBP8.11□□□□□ -1.11
SDCBP-206ENST00000519115 SNX9Q9Y5X1 595 aa8.11□□□□□ -1.11
SDCBP-206ENST00000519115 ZNF638Q14966 1978 aaKnown RBP8.1□□□□□ -1.11
SDCBP-206ENST00000519115 DENND4CQ5VZ89 1909 aa8.1□□□□□ -1.11
SDCBP-206ENST00000519115 CCDC195A0A1B0GUA6 201 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms