RNA–Protein interactions for RNA: ENST00000518761.8

NPIPB4-204, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 576 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-204	ENST00000518761	SLC6A2	P23975	617 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	MTHFS	P49914	203 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	AGFG1	P52594	562 aa	Known RBP	4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	CACNB3	P54284	484 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	RAB1A	P62820	205 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	SPDYE7P	Q495Y7	208 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	KHDC1L	Q5JSQ8	128 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	ARMC6	Q6NXE6	501 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	NPNT	Q6UXI9	565 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	OVCH2	Q7RTZ1	564 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	DGKH	Q86XP1	1220 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	SYNE4	Q8N205	404 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	ZNF276	Q8N554	614 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	OR56A1	Q8NGH5	318 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	SCAMP4	Q969E2	229 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	TTC17	Q96AE7	1141 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	MED15	Q96RN5	788 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	ARMT1	Q9H993	441 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	SLAMF7	Q9NQ25	335 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	RNF181	Q9P0P0	153 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	CEP72	Q9P209	647 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	MYRF	Q9Y2G1	1151 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	CHST2	Q9Y4C5	530 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	PCDHA1	Q9Y5I3	950 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	FPGT-TNNI3K	V9GXZ4	949 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	SMG6	Q86US8	1419 aa	Known RBP	4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	RGPD1	P0DJD0	1748 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761	ABCA3	Q99758	1704 aa		4.26	□□□□□ -1.73
NPIPB4-204	ENST00000518761		A0A1B0GTW7	788 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	FYB1	O15117	783 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	PLSCR1	O15162	318 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	FAM20B	O75063	409 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	HRG	P04196	525 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	GJB1	P08034	283 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	MYB	P10242	640 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	RARB	P10826	455 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	SLC6A4	P31645	630 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	PTGS2	P35354	604 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	PIGF	Q07326	219 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	ZNF844	Q08AG5	666 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	FOXE3	Q13461	319 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	PTCH1	Q13635	1447 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	KIF22	Q14807	665 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	PDCD4	Q53EL6	469 aa	Known RBP	4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	C20orf194	Q5TEA3	1177 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	EMC10	Q5UCC4	262 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	METRNL	Q641Q3	311 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	CHST15	Q7LFX5	561 aa	Predicted RBP	4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	ZFPM1	Q8IX07	1006 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	THUMPD2	Q9BTF0	503 aa	Known RBP	4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	LRFN3	Q9BTN0	628 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	C1orf43	Q9BWL3	253 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	B3GNT5	Q9BYG0	378 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	KLHL11	Q9NVR0	708 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	PIH1D1	Q9NWS0	290 aa	Known RBP	4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	NUDC	Q9Y266	331 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	NEU2	Q9Y3R4	380 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	CRYBG1	Q9Y4K1	1723 aa		4.25	□□□□□ -1.73
NPIPB4-204	ENST00000518761	ACE	P12821	1306 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	CGNL1	Q0VF96	1302 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	OVOS2	A0A0J9YW53	1432 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	USP6	P35125	1406 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	CPSF1	Q10570	1443 aa	Known RBP	4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	FAM135B	Q49AJ0	1406 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	OVOS2	Q6IE36	1432 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	EDC4	Q6P2E9	1401 aa	Known RBP	4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761		A0A1W2PPL8	197 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	AHRR	A9YTQ3	701 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	ZNF185	O15231	689 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	PHGDH	O43175	533 aa	Known RBP	4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	ERN1	O75460	977 aa	Known RBP	4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	MATN4	O95460	622 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	GPANK1	O95872	356 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	ZBED1	O96006	694 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	C1S	P09871	688 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	LAG3	P18627	525 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	KCNJ5	P48544	419 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	NOMO3	P69849	1222 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	FAM193A	P78312	1265 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	TUBA3C	Q13748	450 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	HABP2	Q14520	560 aa	Predicted RBP	4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	GRM3	Q14832	879 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	LLGL1	Q15334	1064 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	NOMO2	Q5JPE7	1267 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	MIIP	Q5JXC2	388 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	TUBA3E	Q6PEY2	450 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	DARS2	Q6PI48	645 aa	Known RBP	4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	CCDC149	Q6ZUS6	474 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	MAEA	Q7L5Y9	396 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	SPRED1	Q7Z699	444 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	PPP1R3B	Q86XI6	285 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	MAPKAPK5	Q8IW41	473 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	KIAA0319L	Q8IZA0	1049 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	FAM43A	Q8N2R8	423 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	SLC17A8	Q8NDX2	589 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	PLBD2	Q8NHP8	589 aa		4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	CACTIN	Q8WUQ7	758 aa	Known RBP	4.24	□□□□□ -1.73
NPIPB4-204	ENST00000518761	ZNF503	Q96F45	646 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms